Gene
RNA
| Item | Value |
|---|---|
| gene id | G410777 |
| gene name | LOC106586052 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 50017934 ~ 50018255 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU465869 | True | 322 | lncRNA | 0.56 | 1 | 50017934 | 50018255 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523994 | rax | coding | downstream | 354352 | 49657986 ~ 49663582 (-) |
| col27a1a | LOC106560409 | coding | downstream | 646946 | 49088535 ~ 49370988 (-) |
| notch1 | notch1 | coding | downstream | 1063065 | 48881393 ~ 48954869 (-) |
| LOC110523989 | LOC106560554 | coding | downstream | 1170384 | 48729983 ~ 48847550 (-) |
| mier3a | LOC105008092 | coding | downstream | 1324912 | 48646906 ~ 48693022 (-) |
| LOC110522869 | LOC106613981 | coding | upstream | 126723 | 50144978 ~ 50150252 (-) |
| LOC118964617 | NA | coding | upstream | 412465 | 50416344 ~ 50468752 (-) |
| LOC110523998 | LOC106613480 | coding | upstream | 807354 | 50825609 ~ 50987810 (-) |
| kif14 | LOC106613482 | coding | upstream | 969634 | 50987889 ~ 51039285 (-) |
| LOC110524002 | rubcn | coding | upstream | 1134025 | 51152280 ~ 51174432 (-) |
| G410773 | NA | non-coding | downstream | 4874 | 50012857 ~ 50013060 (-) |
| G410762 | NA | non-coding | downstream | 20039 | 49997545 ~ 49997895 (-) |
| G410759 | NA | non-coding | downstream | 24431 | 49993265 ~ 49993503 (-) |
| G410750 | NA | non-coding | downstream | 36632 | 49981095 ~ 49981302 (-) |
| G410747 | NA | non-coding | downstream | 39072 | 49978651 ~ 49978862 (-) |
| G410779 | LOC106568517 | non-coding | upstream | 3194 | 50021449 ~ 50021950 (-) |
| G410809 | NA | non-coding | upstream | 91676 | 50109931 ~ 50110240 (-) |
| G410884 | NA | non-coding | upstream | 167264 | 50185519 ~ 50185719 (-) |
| G410896 | NA | non-coding | upstream | 175893 | 50194148 ~ 50194376 (-) |
| G410963 | NA | non-coding | upstream | 225416 | 50243671 ~ 50244020 (-) |
| G410168 | NA | other | downstream | 441478 | 49533916 ~ 49576456 (-) |
| G408782 | sec16a | other | downstream | 1660369 | 48353302 ~ 48357565 (-) |
| G408664 | NA | other | downstream | 1794714 | 48221952 ~ 48223220 (-) |
| LOC110523962 | LOC106561388 | other | downstream | 3407819 | 46572673 ~ 46610314 (-) |
| G406588 | NA | other | downstream | 3783397 | 46219667 ~ 46234537 (-) |
| G411459 | NA | other | upstream | 600636 | 50618891 ~ 50619175 (-) |
| G411929 | NA | other | upstream | 704059 | 50722314 ~ 50723061 (-) |
| G411930 | NA | other | upstream | 704904 | 50723159 ~ 50724077 (-) |
| LOC110524003 | LOC106613485 | other | upstream | 1161503 | 51179758 ~ 51228505 (-) |
| G412372 | NA | other | upstream | 1355210 | 51373465 ~ 51377130 (-) |
