Gene
RNA
| Item | Value |
|---|---|
| gene id | G410959 |
| gene name | LOC100380853 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 50240869 ~ 50241342 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU466062 | True | 474 | lncRNA | 0.61 | 1 | 50240869 | 50241342 |
50,240,000
50,240,400
50,240,800
50,241,200
50,241,600
50,242,000
50,242,400
50,242,800
50,243,200
50,243,600
50,244,000
50,244,400
50,244,800
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523996 | hcn1 | coding | upstream | 167611 | 49889400 ~ 50073258 (+) |
| LOC110522958 | LOC106560427 | coding | upstream | 498039 | 49736646 ~ 49742830 (+) |
| LOC110523995 | LOC106560436 | coding | upstream | 508324 | 49694223 ~ 49732545 (+) |
| LOC110522957 | LOC106613948 | coding | upstream | 717416 | 49521853 ~ 49523453 (+) |
| psmd5 | psmd5 | coding | upstream | 726424 | 49502161 ~ 49514445 (+) |
| nr5a2 | LOC106613481 | coding | downstream | 487760 | 50729102 ~ 50825399 (+) |
| camsap2a | camsap2 | coding | downstream | 818492 | 51059834 ~ 51153381 (+) |
| LOC110524004 | LOC106613487 | coding | downstream | 1042194 | 51283536 ~ 51291754 (+) |
| LOC118964752 | NA | coding | downstream | 1154235 | 51395577 ~ 51395631 (+) |
| LOC110524007 | LOC106613489 | coding | downstream | 1178088 | 51419430 ~ 51435491 (+) |
| G410913 | NA | non-coding | upstream | 33530 | 50207121 ~ 50207339 (+) |
| G410911 | NA | non-coding | upstream | 35252 | 50205402 ~ 50205617 (+) |
| G410886 | NA | non-coding | upstream | 53834 | 50186824 ~ 50187035 (+) |
| G410808 | NA | non-coding | upstream | 136661 | 50103512 ~ 50104208 (+) |
| G410496 | NA | non-coding | upstream | 163026 | 50075452 ~ 50077843 (+) |
| G410962 | NA | non-coding | downstream | 2505 | 50243847 ~ 50244161 (+) |
| G410974 | NA | non-coding | downstream | 8882 | 50250224 ~ 50250428 (+) |
| G411083 | NA | non-coding | downstream | 93851 | 50335193 ~ 50335419 (+) |
| G411108 | NA | non-coding | downstream | 108605 | 50349947 ~ 50350151 (+) |
| G411141 | NA | non-coding | downstream | 135063 | 50376405 ~ 50376618 (+) |
| G409191 | NA | other | upstream | 1259098 | 48948138 ~ 48981771 (+) |
| setd9 | setd9 | other | upstream | 1599254 | 48609741 ~ 48641668 (+) |
| LOC110523980 | LOC106560682 | other | upstream | 2076982 | 48149869 ~ 48221948 (+) |
| G408222 | NA | other | upstream | 2201776 | 48036626 ~ 48039093 (+) |
| G411519 | NA | other | downstream | 421530 | 50662872 ~ 50663640 (+) |
| G412859 | NA | other | downstream | 1560908 | 51802250 ~ 51802820 (+) |
| G414007 | NA | other | downstream | 2520047 | 52761389 ~ 52761729 (+) |
| G414041 | NA | other | downstream | 2537175 | 52778517 ~ 52779479 (+) |
