Gene
RNA
| Item | Value |
|---|---|
| gene id | G410962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 50243847 ~ 50244161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU466065 | True | 315 | lncRNA | 0.41 | 1 | 50243847 | 50244161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523996 | hcn1 | coding | upstream | 170589 | 49889400 ~ 50073258 (+) |
| LOC110522958 | LOC106560427 | coding | upstream | 501017 | 49736646 ~ 49742830 (+) |
| LOC110523995 | LOC106560436 | coding | upstream | 511302 | 49694223 ~ 49732545 (+) |
| LOC110522957 | LOC106613948 | coding | upstream | 720394 | 49521853 ~ 49523453 (+) |
| psmd5 | psmd5 | coding | upstream | 729402 | 49502161 ~ 49514445 (+) |
| nr5a2 | LOC106613481 | coding | downstream | 484941 | 50729102 ~ 50825399 (+) |
| camsap2a | camsap2 | coding | downstream | 815673 | 51059834 ~ 51153381 (+) |
| LOC110524004 | LOC106613487 | coding | downstream | 1039375 | 51283536 ~ 51291754 (+) |
| LOC118964752 | NA | coding | downstream | 1151416 | 51395577 ~ 51395631 (+) |
| LOC110524007 | LOC106613489 | coding | downstream | 1175269 | 51419430 ~ 51435491 (+) |
| G410959 | LOC100380853 | non-coding | upstream | 2505 | 50240869 ~ 50241342 (+) |
| G410913 | NA | non-coding | upstream | 36508 | 50207121 ~ 50207339 (+) |
| G410911 | NA | non-coding | upstream | 38230 | 50205402 ~ 50205617 (+) |
| G410886 | NA | non-coding | upstream | 56812 | 50186824 ~ 50187035 (+) |
| G410808 | NA | non-coding | upstream | 139639 | 50103512 ~ 50104208 (+) |
| G410974 | NA | non-coding | downstream | 6063 | 50250224 ~ 50250428 (+) |
| G411083 | NA | non-coding | downstream | 91032 | 50335193 ~ 50335419 (+) |
| G411108 | NA | non-coding | downstream | 105786 | 50349947 ~ 50350151 (+) |
| G411141 | NA | non-coding | downstream | 132244 | 50376405 ~ 50376618 (+) |
| G411255 | NA | non-coding | downstream | 226137 | 50470298 ~ 50470618 (+) |
| G409191 | NA | other | upstream | 1262076 | 48948138 ~ 48981771 (+) |
| setd9 | setd9 | other | upstream | 1602232 | 48609741 ~ 48641668 (+) |
| LOC110523980 | LOC106560682 | other | upstream | 2079960 | 48149869 ~ 48221948 (+) |
| G408222 | NA | other | upstream | 2204754 | 48036626 ~ 48039093 (+) |
| G411519 | NA | other | downstream | 418711 | 50662872 ~ 50663640 (+) |
| G412859 | NA | other | downstream | 1558089 | 51802250 ~ 51802820 (+) |
| G414007 | NA | other | downstream | 2517228 | 52761389 ~ 52761729 (+) |
| G414041 | NA | other | downstream | 2534356 | 52778517 ~ 52779479 (+) |
