Gene
RNA
| Item | Value |
|---|---|
| gene id | G411591 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 50716997 ~ 50717242 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU466713 | True | 246 | lncRNA | 0.33 | 1 | 50716997 | 50717242 |
50,716,000
50,716,400
50,716,800
50,717,200
50,717,600
50,718,000
50,718,400
50,718,800
50,719,200
50,719,600
50,720,000
NC_048569.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523996 | hcn1 | coding | upstream | 643739 | 49889400 ~ 50073258 (+) |
| LOC110522958 | LOC106560427 | coding | upstream | 974167 | 49736646 ~ 49742830 (+) |
| LOC110523995 | LOC106560436 | coding | upstream | 984452 | 49694223 ~ 49732545 (+) |
| LOC110522957 | LOC106613948 | coding | upstream | 1193544 | 49521853 ~ 49523453 (+) |
| psmd5 | psmd5 | coding | upstream | 1202552 | 49502161 ~ 49514445 (+) |
| nr5a2 | LOC106613481 | coding | downstream | 11860 | 50729102 ~ 50825399 (+) |
| camsap2a | camsap2 | coding | downstream | 342592 | 51059834 ~ 51153381 (+) |
| LOC110524004 | LOC106613487 | coding | downstream | 566294 | 51283536 ~ 51291754 (+) |
| LOC118964752 | NA | coding | downstream | 678335 | 51395577 ~ 51395631 (+) |
| LOC110524007 | LOC106613489 | coding | downstream | 702188 | 51419430 ~ 51435491 (+) |
| G411585 | NA | non-coding | upstream | 3617 | 50713081 ~ 50713380 (+) |
| G411573 | NA | non-coding | upstream | 18876 | 50697895 ~ 50698121 (+) |
| G411490 | NA | non-coding | upstream | 74560 | 50642207 ~ 50642437 (+) |
| G411474 | NA | non-coding | upstream | 85778 | 50630912 ~ 50631219 (+) |
| G411472 | NA | non-coding | upstream | 87297 | 50629501 ~ 50629700 (+) |
| G411593 | NA | non-coding | downstream | 1526 | 50718768 ~ 50719020 (+) |
| G411740 | LOC106613482 | non-coding | downstream | 269344 | 50986586 ~ 50988857 (+) |
| G411746 | NA | non-coding | downstream | 277804 | 50995046 ~ 50995544 (+) |
| G411748 | NA | non-coding | downstream | 280368 | 50997610 ~ 50997838 (+) |
| G411519 | NA | other | upstream | 53357 | 50662872 ~ 50663640 (+) |
| G409191 | NA | other | upstream | 1735226 | 48948138 ~ 48981771 (+) |
| setd9 | setd9 | other | upstream | 2075382 | 48609741 ~ 48641668 (+) |
| LOC110523980 | LOC106560682 | other | upstream | 2553110 | 48149869 ~ 48221948 (+) |
| G412859 | NA | other | downstream | 1085008 | 51802250 ~ 51802820 (+) |
| G414007 | NA | other | downstream | 2044147 | 52761389 ~ 52761729 (+) |
| G414041 | NA | other | downstream | 2061275 | 52778517 ~ 52779479 (+) |
| G414488 | LOC106562530 | other | downstream | 2394941 | 53112183 ~ 53112507 (+) |
