G411593


Basic Information

Item Value
gene id G411593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 50718768 ~ 50719020 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU466715
GTTCTGGTCACAGAGAACAAAGCacatggctagctagttggccAAAGCAGATTCTACCATTTCATAATAGCCTGTAATCACTAGTTATTACTTTTAAACAAGATACCTTTTTTTTTGTGGATTATTGTTGTTTGGTTTACTTTATGAACAGTCACTGAGATTATATTTGGTTATCAATGCAAAataggctactttgatgaatagCCTATATAGCCTATAGATCAGATCAAGGTTTCAAGCACCTACACTGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU466715 True 253 lncRNA 0.36 1 50718768 50719020

Neighbor

gene id symbol gene type direction distance location
LOC110523996 hcn1 coding upstream 645510 49889400 ~ 50073258 (+)
LOC110522958 LOC106560427 coding upstream 975938 49736646 ~ 49742830 (+)
LOC110523995 LOC106560436 coding upstream 986223 49694223 ~ 49732545 (+)
LOC110522957 LOC106613948 coding upstream 1195315 49521853 ~ 49523453 (+)
psmd5 psmd5 coding upstream 1204323 49502161 ~ 49514445 (+)
nr5a2 LOC106613481 coding downstream 10082 50729102 ~ 50825399 (+)
camsap2a camsap2 coding downstream 340814 51059834 ~ 51153381 (+)
LOC110524004 LOC106613487 coding downstream 564516 51283536 ~ 51291754 (+)
LOC118964752 NA coding downstream 676557 51395577 ~ 51395631 (+)
LOC110524007 LOC106613489 coding downstream 700410 51419430 ~ 51435491 (+)
G411591 NA non-coding upstream 1526 50716997 ~ 50717242 (+)
G411585 NA non-coding upstream 5388 50713081 ~ 50713380 (+)
G411573 NA non-coding upstream 20647 50697895 ~ 50698121 (+)
G411490 NA non-coding upstream 76331 50642207 ~ 50642437 (+)
G411474 NA non-coding upstream 87549 50630912 ~ 50631219 (+)
G411740 LOC106613482 non-coding downstream 267566 50986586 ~ 50988857 (+)
G411746 NA non-coding downstream 276026 50995046 ~ 50995544 (+)
G411748 NA non-coding downstream 278590 50997610 ~ 50997838 (+)
G411784 NA non-coding downstream 320765 51039785 ~ 51040000 (+)
G411519 NA other upstream 55128 50662872 ~ 50663640 (+)
G409191 NA other upstream 1736997 48948138 ~ 48981771 (+)
setd9 setd9 other upstream 2077153 48609741 ~ 48641668 (+)
LOC110523980 LOC106560682 other upstream 2554881 48149869 ~ 48221948 (+)
G412859 NA other downstream 1083230 51802250 ~ 51802820 (+)
G414007 NA other downstream 2042369 52761389 ~ 52761729 (+)
G414041 NA other downstream 2059497 52778517 ~ 52779479 (+)
G414488 LOC106562530 other downstream 2393163 53112183 ~ 53112507 (+)

Expression


Co-expression Network