G412372


Basic Information

Item Value
gene id G412372
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51373465 ~ 51377130 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU467562
AAGCACAACTGTTCCATGATTTTAACTGGCAGTTTTattctgtagttttagtcagaaatGTCACCTTCCGTGAGAACTATAAAGTACATGACAATACAGTTAAGCACACTCTTACAACTTTCTTGTCTCATGAGTAACTTATTAGCTTGATGTAACtctgaaatgcttacatacataaAAACAGTTTAGCCAGAGGTATAACAATATCagattaaacacatgaataaagaAAATACCTCATTGGCTGCTTATTACAGAAGAGAGGAAATCAAAAACAACACACTTCTTATTCCTGGCATGAATTCACGCTTCATCCTTAATTATTATAATGTTACCATCCTAACATAGACGCTTCAACCTTTACGAACTACACTCGAAGACTCAAAAAACCTAGCTAATACAGTGTGGGATTGCCGTCATTCCAAAAGTGTGTTGCTACGATAATAATCCCCGTTACAACAGTTCATAGCCACGTAGTTCCGCTTGTCTTACCATTCCCCCCGCATAGTGAACacgtaaacaattcaaacaaaaaacaacaacatagactgACAGGTTAATTGTCAGTTACAAAAAGTAAAGTCGTACAACTTCACATGAGATACATTTTCCATTTTAGCTTCACCTTTCCTATAAAAATATGGCAGTATATGTTAGAAATGTCTAATCCTTCCAATTGTTACATGACTGTTCAGAATCTGCAGAATATAACGATCCAATAGGCTGAATTAAGGTGTCGTTAAATGATTTGCTCCATCACACAAACGCATAAAAGTACACACACCAACAGAATCAAGAATGTTTATTCAAATGGTCATTAATTGATAGAAAAGCTAAAAACCAACTACATTAATCTGAGACATACTCTGGCAGTGTGCAGTATTAATGACCAGTAAGCTCAGACAATATCCATAATGACTATAAAAAGTACGAACACTTCAAGACCCTATGGTCAGATGTCTTTTCCTAAAGGCGGCATGGTAAGTAATGGAATTGAAGTTTCTGGGTGTGTGGGAATAATAAATAGTGTTGCTGTAGACACTGGATAATctggctaacacacacacatatttaacaTAGCTGTGATACTGCACTTATGTTACTCAGTTCAGGTAACATTCAATGTCCTGCGTTTGTGTTAACCATGGCAGCCAGCATTGCAAATAAAGACATTCGTAGAACCATAATCAACCTCTTTCTGTGGATCCTTTCCCCTTAATGTAATTTTCATGTCAGCCAGGCCAATCTtttaatataaatacattttatttcacgCTTTAGTTGAGCAAAATAAGTAGTGTTGCTTGGTTGACAAGGCAATTGAAAGAGTGCCTGAGTCGTGCAGAAAAATATCAATGCTTTATCCTCAAGAGAGAACAAGTTGTTGTTTCCCTGACTGCTACCTACAGTATGGCTGCTACTCAGAAATGCTATAGCCTAACAGTAAATTAATATATGACATTCACTGCAATTATAAACCTGTCTCCAGTATAACgctacatacacagacagacccaCTGTGGATCTTTGTAAAATAAATCTGTATGAAAAGGCATCCCAGGTCTGTTTTGTCAACGGGCACAACTTTGACCcttttcaggaaactaggcgtatgttacgggtcactacttcacaggagagccatttgaacgtaaacttatttttatttatcaaaattgttttttgggcagaaatgccttctgtaaatatgaataaaattgttaaattatgagcctagttagtttagccacagaaaaaataTGACATTCACTGCAATTATAAACCTGTCTCCAGTATAACgctacatacacagacagacccaCTGTGGATCTTTGTAAAATAAATCTGTATGAAAAGGCATCCCAGGTCTGTTTTGTCAACGGGCACAACTTTGACCcttttcaggaaactaggcgtatgttacgggtcactacttcacaggagagccatttgaacgtaaacttatttttatttatcaaaattgttttttgggcagaaatgccttctataaatacgaataaaattgttaaattatgagcctagttagtttagccacagaaaaagggagcaaccttcccactagccatgattggctgaaatgAGTGGGATGCCAAGATttgtctgccatatagcacgcttctgtctatttgagctggtcagtatgtgtaggtaatcctgtctaatgcgactttaaaatgtttttttatttttattgtgtaGTAAAACTTAACAAAAGACTTCTATGTAAGtgtccatttcaatagaatgtcactgcaaaAACTGTTTCAGAGCACTCGTCTGAGTGGGACAGAGCGCAGAATACCTGATTAATTTGCcaatgctcaacacccgttgaatacggctggtgtcagtaaacgtcggcaaaaaaagcataattaaattgttgcgaggagcacagttagtcaccaacactctggataacataaaaacagcctaactagTTCTGATAgagtgagtaaaatggtcagagtttgGGTGGGGGCTAAAGCTTAAAATGATTCTCATGGGATTgcacacggtcagtgtgaaccagagtgacttgacacaacaacGGGCCAAGCAAGCTGTACCAACAAAACGGAAACAACACAGGACGTCTTATTTAGCGAAAGGGCTTGCAGTCTGCCGTGAagtgttcatccatgtatacaggtaagagtctagctacagtttcagatattatacgtttctaattttgtcaaagttgttttcattgcaagttaaagcttactgttagctagctagctaacattccgTTTATGGTCTgtgtgtagtaatgttatctcagaatgccatttcgcattactagttatagcctaactagctaacattgaacctgtttGGTTAACcttttagctagctatgacaatcggtttgtattgctagtactctatggattaggattatggttaattgtttagcttgcatgtctaaacaaaagactccacttcgccagatgattacatgacccatcaagttagccaggtgtgacTGACGGTGATTACGGCTATCTATTGTATAATGCcaaaatatttgtatctggaatttgtctttcagcatcagtagaacacgcctgactctcctccaacagtcatacaaggagaatggtctaatgcctcccatcaaaaagagagctggTCCAAGCAAGCACAGGTTACAGCTGAAGCATGAGGACTTGCAGCAAGTTGTGAACTTCATCAACAACTACGCAGAGGACAATGCAATAGTATTACCAGGATGCCACCCAGGACGCAAACGTTGGAAAGCTGCTGACATCCCATGTGACAAAAGCAGTGACGTGGCGTCTCTACACGGAATCGATGACAACACTTGcgtcggtgctctggagcctggtgttgtcaCCAAGGAGCGTTCGTACTCCGTCGGGAACAGGTTTCAGCTGCTGAGCaacgctgacatccttcctcccatagatggtctgcctgtacaagcaccacctggactggacacagctagacaaacttatctttttgagaagatcagggagttttgtGACTAAGAGGCTATTGTCATCACa

Function

NR:

description
hypothetical protein cypCar_00043689, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467562 True 3559 TUCP 0.39 2 51373465 51377130

Neighbor

gene id symbol gene type direction distance location
LOC110524003 LOC106613485 coding downstream 147648 51179758 ~ 51228505 (-)
LOC110524002 rubcn coding downstream 199033 51152280 ~ 51174432 (-)
kif14 LOC106613482 coding downstream 334180 50987889 ~ 51039285 (-)
LOC110523998 LOC106613480 coding downstream 385655 50825609 ~ 50987810 (-)
LOC118964617 NA coding downstream 904713 50416344 ~ 50468752 (-)
LOC110522962 LOC106613492 coding upstream 256167 51633297 ~ 51768111 (-)
LOC110522967 LOC106613496 coding upstream 663278 52040408 ~ 52101949 (-)
LOC110524012 NA coding upstream 725118 52102248 ~ 52107624 (-)
actl6a acl6b coding upstream 754872 52132002 ~ 52146396 (-)
LOC110524016 LOC100380721 coding upstream 794924 52172054 ~ 52199848 (-)
G412365 NA non-coding downstream 38217 51289977 ~ 51335248 (-)
G412295 NA non-coding downstream 109763 51263449 ~ 51263702 (-)
G412240 NA non-coding downstream 223806 51139599 ~ 51149659 (-)
G412184 NA non-coding downstream 324686 51048562 ~ 51048779 (-)
G412422 NA non-coding upstream 13315 51390445 ~ 51395338 (-)
G412426 NA non-coding upstream 19764 51396894 ~ 51405294 (-)
G412432 NA non-coding upstream 30042 51407172 ~ 51407454 (-)
G412433 NA non-coding upstream 32173 51409303 ~ 51409543 (-)
G412435 NA non-coding upstream 32550 51409680 ~ 51410115 (-)
G411930 NA other downstream 649388 50723159 ~ 50724077 (-)
G411929 NA other downstream 650404 50722314 ~ 50723061 (-)
G411459 NA other downstream 754290 50618891 ~ 50619175 (-)
G410168 NA other downstream 1797009 49533916 ~ 49576456 (-)
G412613 NA other upstream 181248 51558378 ~ 51612562 (-)
G415256 LOC106613513 other upstream 2240553 53617683 ~ 53618864 (-)
G415420 NA other upstream 2513630 53890760 ~ 53892906 (-)
G415464 nexn other upstream 2626601 54002448 ~ 54005673 (-)
G416110 NA other upstream 2986156 54363286 ~ 54392411 (-)

Expression


Co-expression Network