G412613


Basic Information

Item Value
gene id G412613
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51558378 ~ 51612562 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU467825
GTGACATTTCTCAGAAGGATCCGATAACATCAATGTATCAGAGATAAAATGAGGACAGGACATTTAATATGGAAGCCAAACTCAATTTTGTGTATAATAAAGTCCTTAATTATTGCTGTAATTGATGTTGAAATTCATTAAGACAAAATCGCAACGGAAAATGCATTTATAAAATCAAACAAACAATCCAACATTCAGCAATACGTTTTCAGTCCACTATTTGCAGTTAATATAATATAGTCCTTAATTACATGGATAGTATACATATGAGTTGTATAGGGAGAGAAAATATAAAAAGACAATTTCAGAAAATGAACAGCTATATGTTGTATTTAAGTATAGTCCCGTTTATACCTGCACATAACATGTCAAGACCttatcttgtccacattctgattgtgctcACATTTTTAGACAGGTATAGACAATTTAAAGAACagatcttcctgaccacctccAGACAGTCAGGGATGAATTGATTGGTTGGATGAAAGCTCAGTGGGCGCGTTTTTACAGGTGAGAGTCAAAGCAATGTTACATCCAGAGGTAAAAAAATTTGATCACACTCCGTTATTTTAATCGTTTTGGCAGGTATAATTAGGTATAAGGTATAATTAGAATGAGGATCTGTGTCCGATCTGATACAGACACAGAAagcatgttagcaccaggtataattGGCTGAAGAGCTCTTCGTATTGTAAATGCAATTCCGAAAAGATTGACAGaatattgagttgccctcagAAAAGACTCAATttttcggggcatggactctacaagttgtcgaaagcattctacagggatactggcccatgttgactccactgcTTCCCACAGTGGTTGGTTGGTGGACGATTCCTGATACACACTGGACATTTGTGTGTGAAAAACCCATCAGCATTGCAGGTCTTGACACACTCAatccggtgcgcctggcacctacagtactaccataccccattcaaaggcacttaaatcttttgtcttgcccattcaccctcaatggctccttgtctcaaggcttagaaatccttCTGTGGCACTTTCCTGCAGTCTATGACCAAAAGAacctttggcctcatgggtggaatgttaattATTTTCATAATTCGAAACAAAAATCTGGTGTATCTCAAAcagttatatttcagtcttctgtgatgtgtaTATAAAGTTAAATATTGGGATACAAACACAATTTAATACTTTTAAactctgacatggtacaggtgtattTTTTTAAAGTCCATAACCATGAGGTGTATACTCTTGTTTAAGGTGACCATGATTTTGCCCAGTACAGTAAAAGGTTAccggtctcctcctcttcatctacactgattgtttGTAGGTGTTGTTTTTTGCTATCCAATGAGCAGGAGTCAAAAATACTTGAGCTTGAAATATAATAGTGAGCATTTCAGAAACAGCGGGTACTTTAACTCAAACATGAACATACAGAAACGGACAAACacagggcctcccaagtggcgcagcggtctaaggcagtgctagatgcttcactacagacctgggttgcAGCCGGTTGCGACTGAgatgcggcgcacaattggtccagcatcgtccgggttagtggagggtttggccggccgggatgtccatgtcccatcgcactctagcaactcgtgtggcggaccgggcgcatgcacactgacttgtttcctccgacacattggtgcggctggcttccaggttcaATCCCAACATGAGATTGAATATGAAATGATACTCTTAAACAACATACGGCTTATTTTccccaacaaaacaaaaacactactGACTACCCCCCAATCCCCTCACAAACAGATAACTAGTCTGGTGTCAAACATGGAGAATCTGACAATACATTTTTACCCCTAAAATCACCCACTATCAATCTTTGCATGTGCCACATTTATGGGCTTTTATCGGAAGAGTGACAAACCAGCAACGTGCACTGTACATCGACTCACACTTCAAAGTTTTACTGTAAACATCAGTGATGACATTAAGGTTCTGGAGAAACGGCCTTCTGATACTGGTGCTGAGCACACCCCGTTAGAATTCCAGACCTATCTGCCACTTCAAAGTGGGTCCTCCTGAGTTGTAGCATCTCCCTCCCTCATGGCCTCTGTTGCGAGTCGTACTGCTGGTAGCGGTTCAGCTTCTCCGGGTCGTTTGACGCCATCTGGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467825 True 2197 TUCP 0.42 2 51558378 51612562

Neighbor

gene id symbol gene type direction distance location
LOC110524005 LOC106613488 coding downstream 175627 51296717 ~ 51382751 (-)
LOC110524003 LOC106613485 coding downstream 332561 51179758 ~ 51228505 (-)
LOC110524002 rubcn coding downstream 383946 51152280 ~ 51174432 (-)
kif14 LOC106613482 coding downstream 519093 50987889 ~ 51039285 (-)
LOC110523998 LOC106613480 coding downstream 570568 50825609 ~ 50987810 (-)
LOC110522962 LOC106613492 coding upstream 20735 51633297 ~ 51768111 (-)
LOC110522967 LOC106613496 coding upstream 427846 52040408 ~ 52101949 (-)
LOC110524012 NA coding upstream 489686 52102248 ~ 52107624 (-)
actl6a acl6b coding upstream 519440 52132002 ~ 52146396 (-)
LOC110524016 LOC100380721 coding upstream 559492 52172054 ~ 52199848 (-)
G412563 NA non-coding downstream 31626 51469541 ~ 51526752 (-)
G412445 NA non-coding downstream 140882 51417137 ~ 51417496 (-)
G412435 NA non-coding downstream 148263 51409680 ~ 51410115 (-)
G412433 NA non-coding downstream 148835 51409303 ~ 51409543 (-)
G412432 NA non-coding downstream 150924 51407172 ~ 51407454 (-)
G412630 NA non-coding upstream 167 51612729 ~ 51616333 (-)
G412632 NA non-coding upstream 3840 51616402 ~ 51616797 (-)
G412633 NA non-coding upstream 4270 51616832 ~ 51617123 (-)
G412637 NA non-coding upstream 7824 51620386 ~ 51620676 (-)
G412706 NA non-coding upstream 14634 51627196 ~ 51670347 (-)
G412372 NA other downstream 181248 51373465 ~ 51377130 (-)
G411930 NA other downstream 834301 50723159 ~ 50724077 (-)
G411929 NA other downstream 835317 50722314 ~ 50723061 (-)
G411459 NA other downstream 939203 50618891 ~ 50619175 (-)
G415256 LOC106613513 other upstream 2005121 53617683 ~ 53618864 (-)
G415420 NA other upstream 2278198 53890760 ~ 53892906 (-)
G415464 nexn other upstream 2391169 54002448 ~ 54005673 (-)
G416110 NA other upstream 2750724 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 3528753 55123617 ~ 55181458 (-)

Expression


Co-expression Network