G412623


Basic Information

Item Value
gene id G412623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51595824 ~ 51606490 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU467843
agattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagatttttttttctagatttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttcttttcaagattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagatttttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttttttctagatttttttctagatttttttctagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattt
>TU467839
ttttttttttcagattttgttctagattttttttgtagattttttttctagatttttttctagatttttttctagattttttttctagatttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagatttttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttc
>TU467840
attttttttctagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttttttttagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagatttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagatttttttctagatttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagatttttttctagattttttttctagatttttttctagattttttttctagatttttttctagatttttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagatttcttttctagattttttttctagatttttttctagattttttttctagattttttttctagactttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagatttttttctagattttttttctagatttttttctagatttttttttctagattttttttctagattttttttctagattttttttctagatttttttctagatttttttctagattttttttctagattttttttctagatttttttttctagatttttttctagatttttattctagattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagatttttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttttc
>TU467837
agattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagatttttttttctagatttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttcttttcaagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttcttttctagattttttttctagatttttttctagattttttttctagattttttttcagattttttttctagattttttttctagattttttttctagattttttttctagatttttttttagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttt
>TU467838
agattttttttctagattttttttctagatttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttttttctagatttttttttctagatttttttctagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagatttctttctagattttttttctagatttttttctagatttttttctagattttttttcaagattttttttctagattttttttctagattttttttctagattttttttctagattttttttctagatttcttttctagattttttttctagattttttttctagattttttttctagatttttttttagattttttttctagattttttttctagattttttttctagatttttttctagattttttttctagattttttttctagattttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU467843 False 681 lncRNA 0.16 3 51595824 51602950
TU467839 False 366 lncRNA 0.16 2 51598332 51606490
TU467840 False 1434 lncRNA 0.16 3 51598332 51601192
TU467837 False 534 lncRNA 0.16 3 51601339 51602950
TU467838 True 520 lncRNA 0.16 3 51601339 51602950

Neighbor

gene id symbol gene type direction distance location
LOC110524005 LOC106613488 coding downstream 213073 51296717 ~ 51382751 (-)
LOC110524003 LOC106613485 coding downstream 370007 51179758 ~ 51228505 (-)
LOC110524002 rubcn coding downstream 421392 51152280 ~ 51174432 (-)
kif14 LOC106613482 coding downstream 556539 50987889 ~ 51039285 (-)
LOC110523998 LOC106613480 coding downstream 608014 50825609 ~ 50987810 (-)
LOC110522962 LOC106613492 coding upstream 26807 51633297 ~ 51768111 (-)
LOC110522967 LOC106613496 coding upstream 433918 52040408 ~ 52101949 (-)
LOC110524012 NA coding upstream 495758 52102248 ~ 52107624 (-)
actl6a acl6b coding upstream 525512 52132002 ~ 52146396 (-)
LOC110524016 LOC100380721 coding upstream 565564 52172054 ~ 52199848 (-)
G412563 NA non-coding downstream 69072 51469541 ~ 51526752 (-)
G412445 NA non-coding downstream 178328 51417137 ~ 51417496 (-)
G412435 NA non-coding downstream 185709 51409680 ~ 51410115 (-)
G412433 NA non-coding downstream 186281 51409303 ~ 51409543 (-)
G412432 NA non-coding downstream 188370 51407172 ~ 51407454 (-)
G412630 NA non-coding upstream 6239 51612729 ~ 51616333 (-)
G412632 NA non-coding upstream 9912 51616402 ~ 51616797 (-)
G412633 NA non-coding upstream 10342 51616832 ~ 51617123 (-)
G412637 NA non-coding upstream 13896 51620386 ~ 51620676 (-)
G412706 NA non-coding upstream 20706 51627196 ~ 51670347 (-)
G412372 NA other downstream 218694 51373465 ~ 51377130 (-)
G411930 NA other downstream 871747 50723159 ~ 50724077 (-)
G411929 NA other downstream 872763 50722314 ~ 50723061 (-)
G411459 NA other downstream 976649 50618891 ~ 50619175 (-)
G415256 LOC106613513 other upstream 2011193 53617683 ~ 53618864 (-)
G415420 NA other upstream 2284270 53890760 ~ 53892906 (-)
G415464 nexn other upstream 2397241 54002448 ~ 54005673 (-)
G416110 NA other upstream 2756796 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 3534825 55123617 ~ 55181458 (-)

Expression


Co-expression Network