Gene
RNA
| Item | Value |
|---|---|
| gene id | G412485 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 51618027 ~ 51618451 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU467688 | True | 425 | lncRNA | 0.41 | 1 | 51618027 | 51618451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522961 | LOC106613490 | coding | upstream | 57534 | 51436948 ~ 51612163 (+) |
| LOC110524007 | LOC106613489 | coding | upstream | 182536 | 51419430 ~ 51435491 (+) |
| LOC118964752 | NA | coding | upstream | 222396 | 51395577 ~ 51395631 (+) |
| LOC110524004 | LOC106613487 | coding | upstream | 326273 | 51283536 ~ 51291754 (+) |
| camsap2a | camsap2 | coding | upstream | 479643 | 51059834 ~ 51153381 (+) |
| LOC110524009 | LOC106613493 | coding | downstream | 74449 | 51692900 ~ 51709944 (+) |
| LOC110524010 | LOC106613494 | coding | downstream | 395116 | 52013567 ~ 52031827 (+) |
| LOC110524011 | LOC106613497 | coding | downstream | 488117 | 52106568 ~ 52109717 (+) |
| LOC110524014 | gnb4 | coding | downstream | 528713 | 52147164 ~ 52168561 (+) |
| plaat1 | LOC106613501 | coding | downstream | 604377 | 52222828 ~ 52230021 (+) |
| G412486 | NA | non-coding | upstream | 1728 | 51613325 ~ 51616299 (+) |
| G412523 | NA | non-coding | upstream | 11548 | 51602547 ~ 51606479 (+) |
| G412487 | NA | non-coding | upstream | 47161 | 51528026 ~ 51570866 (+) |
| G412440 | NA | non-coding | upstream | 204243 | 51412090 ~ 51413784 (+) |
| G412636 | NA | non-coding | downstream | 1907 | 51620358 ~ 51620630 (+) |
| G412786 | NA | non-coding | downstream | 117676 | 51736127 ~ 51736403 (+) |
| G412833 | LOC107579696 | non-coding | downstream | 164182 | 51782633 ~ 51783633 (+) |
| G412861 | NA | non-coding | downstream | 186128 | 51804579 ~ 51817658 (+) |
| G412888 | NA | non-coding | downstream | 209668 | 51828119 ~ 51828462 (+) |
| G411519 | NA | other | upstream | 954387 | 50662872 ~ 50663640 (+) |
| LOC110523996 | hcn1 | other | upstream | 1694429 | 49889400 ~ 50073258 (+) |
| G409191 | NA | other | upstream | 2636256 | 48948138 ~ 48981771 (+) |
| setd9 | setd9 | other | upstream | 2976412 | 48609741 ~ 48641668 (+) |
| G412859 | NA | other | downstream | 183799 | 51802250 ~ 51802820 (+) |
| G414007 | NA | other | downstream | 1142938 | 52761389 ~ 52761729 (+) |
| G414041 | NA | other | downstream | 1160066 | 52778517 ~ 52779479 (+) |
| G414488 | LOC106562530 | other | downstream | 1493732 | 53112183 ~ 53112507 (+) |
| G415582 | LOC106584099 | other | downstream | 2559478 | 54177929 ~ 54183430 (+) |
