G412768


Basic Information

Item Value
gene id G412768
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51722847 ~ 51723540 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU468002
tgtgtattcaatagctcctcgtcttCAAATCAATGGCTGAAAATGTGCACTTCAAAACATCCTGgcggagaccggaagaaatggaatccagttagttggatttaccaacaaaaaactccccggataatgacgacaatggcgacatgtgtggaatctgtaggaattgcatgcaggtccataattaattttgtgcccttttaacaatccatgaaagtgacgcatggatattatttttagctttcagtgagcagtttttcttgcgcttttcgatgaaacacacgatctgttatagtcacagccgtgatttaaccagttttagaaacttcagagtgttttctatccacacatactaatcatatgcatatactatattcctggcatgagtagcaggacgctgaaaagttgcgcgatttttaacagaatgttcgaaaaaggagggggtaggatgaagAGGTTTTAACtcaaatacagatgaaaacatgaaatgacccagggaattgatagaacatcactcagagatgcacaaaaacaatataacattcaaaatgggtgaacctTTCCTTTAAGGTAGGCTAGATTATGGAAAACGTAGCTGAAGTAAAAGCGCAAGTGTCCGTTCTCTTTCCAACTCTGGCTCTTTCAACCTGTCAAGCCTATTGGCTGATATAGCCCAGTAATACCGATAGCTTAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU468002 True 694 lncRNA 0.39 1 51722847 51723540

Neighbor

gene id symbol gene type direction distance location
LOC110524005 LOC106613488 coding downstream 340096 51296717 ~ 51382751 (-)
LOC110524003 LOC106613485 coding downstream 497030 51179758 ~ 51228505 (-)
LOC110524002 rubcn coding downstream 548415 51152280 ~ 51174432 (-)
kif14 LOC106613482 coding downstream 683562 50987889 ~ 51039285 (-)
LOC110523998 LOC106613480 coding downstream 735037 50825609 ~ 50987810 (-)
LOC110522967 LOC106613496 coding upstream 316868 52040408 ~ 52101949 (-)
LOC110524012 NA coding upstream 378708 52102248 ~ 52107624 (-)
actl6a acl6b coding upstream 408462 52132002 ~ 52146396 (-)
LOC110524016 LOC100380721 coding upstream 448514 52172054 ~ 52199848 (-)
LOC110524019 LOC106613502 coding upstream 540981 52264521 ~ 52286710 (-)
G412706 NA non-coding downstream 52500 51627196 ~ 51670347 (-)
G412637 NA non-coding downstream 102171 51620386 ~ 51620676 (-)
G412633 NA non-coding downstream 105724 51616832 ~ 51617123 (-)
G412632 NA non-coding downstream 106050 51616402 ~ 51616797 (-)
G412630 NA non-coding downstream 106514 51612729 ~ 51616333 (-)
G412774 NA non-coding upstream 3814 51727354 ~ 51727647 (-)
G412887 NA non-coding upstream 103760 51827300 ~ 51827533 (-)
G413004 NA non-coding upstream 135796 51859336 ~ 51859556 (-)
G413017 NA non-coding upstream 152366 51875906 ~ 51876724 (-)
G413019 NA non-coding upstream 154747 51878287 ~ 51878689 (-)
G412613 NA other downstream 110285 51558378 ~ 51612562 (-)
G412372 NA other downstream 345717 51373465 ~ 51377130 (-)
G411930 NA other downstream 998770 50723159 ~ 50724077 (-)
G411929 NA other downstream 999786 50722314 ~ 50723061 (-)
G415256 LOC106613513 other upstream 1894143 53617683 ~ 53618864 (-)
G415420 NA other upstream 2167220 53890760 ~ 53892906 (-)
G415464 nexn other upstream 2280191 54002448 ~ 54005673 (-)
G416110 NA other upstream 2639746 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 3417775 55123617 ~ 55181458 (-)

Expression


Co-expression Network