G412887



Basic Information


Item Value
gene id G412887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51827300 ~ 51827533 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU468123
ggcatgatgactccttgctctccccagtccacctggccatgctgctgctccagtttaaactgttctgcctgcggctatggaatcctgacctctTCACCGGACgttctacctgtcccagacctgctcttttcaactctctagagacagcaggagtggcagagatactcttaatgatcggctatgaaaagcaaactgacatttactcctgaggtgctgacttgctgcaccctcgac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU468123 True 234 lncRNA 0.52 1 51827300 51827533

Neighbor


gene id symbol gene type direction distance location
LOC110522962 LOC106613492 coding downstream 59189 51633297 ~ 51768111 (-)
LOC110524005 LOC106613488 coding downstream 444549 51296717 ~ 51382751 (-)
LOC110524003 LOC106613485 coding downstream 601483 51179758 ~ 51228505 (-)
LOC110524002 rubcn coding downstream 652868 51152280 ~ 51174432 (-)
kif14 LOC106613482 coding downstream 788015 50987889 ~ 51039285 (-)
LOC110522967 LOC106613496 coding upstream 212875 52040408 ~ 52101949 (-)
LOC110524012 NA coding upstream 274715 52102248 ~ 52107624 (-)
actl6a acl6b coding upstream 304469 52132002 ~ 52146396 (-)
LOC110524016 LOC100380721 coding upstream 344521 52172054 ~ 52199848 (-)
LOC110524019 LOC106613502 coding upstream 436988 52264521 ~ 52286710 (-)
G412774 NA non-coding downstream 99653 51727354 ~ 51727647 (-)
G412768 NA non-coding downstream 103760 51722847 ~ 51723540 (-)
G412706 NA non-coding downstream 156953 51627196 ~ 51670347 (-)
G412637 NA non-coding downstream 206624 51620386 ~ 51620676 (-)
G412633 NA non-coding downstream 210177 51616832 ~ 51617123 (-)
G413004 NA non-coding upstream 31803 51859336 ~ 51859556 (-)
G413017 NA non-coding upstream 48373 51875906 ~ 51876724 (-)
G413019 NA non-coding upstream 50754 51878287 ~ 51878689 (-)
G413040 NA non-coding upstream 79323 51906856 ~ 51914142 (-)
G413097 NA non-coding upstream 169198 51996731 ~ 51996941 (-)
G412613 NA other downstream 214738 51558378 ~ 51612562 (-)
G412372 NA other downstream 450170 51373465 ~ 51377130 (-)
G411930 NA other downstream 1103223 50723159 ~ 50724077 (-)
G411929 NA other downstream 1104239 50722314 ~ 50723061 (-)
G415256 LOC106613513 other upstream 1790150 53617683 ~ 53618864 (-)
G415420 NA other upstream 2063227 53890760 ~ 53892906 (-)
G415464 nexn other upstream 2176198 54002448 ~ 54005673 (-)
G416110 NA other upstream 2535753 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 3313782 55123617 ~ 55181458 (-)

Expression



Co-expression Network