G412923


Basic Information

Item Value
gene id G412923
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51878175 ~ 51878460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU468163
gcacacaggaagtgtggcgaagccaggtaggagacctgcgccaacttcctgtgcttaccggggggcgagagagaccggacaggcaccgtgttatgctgtggagtgcacggtgtccccagtgcgggtgcatagcccggtgtggtacataccagctccgcgtatcggccgggctagagtgggcatcgagccaagtgccatgaagccggctctacgcatctggtctccagtgcgtctccttgggctggCTTaccttgcgcatggtgtccccggtttgcctgcatagccc

Function

NR:

description
PREDICTED: extensin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU468163 True 286 lncRNA 0.63 1 51878175 51878460

Neighbor

gene id symbol gene type direction distance location
LOC110524009 LOC106613493 coding upstream 168231 51692900 ~ 51709944 (+)
LOC110522961 LOC106613490 coding upstream 317682 51436948 ~ 51612163 (+)
LOC110524007 LOC106613489 coding upstream 442684 51419430 ~ 51435491 (+)
LOC118964752 NA coding upstream 482544 51395577 ~ 51395631 (+)
LOC110524004 LOC106613487 coding upstream 586421 51283536 ~ 51291754 (+)
LOC110524010 LOC106613494 coding downstream 135107 52013567 ~ 52031827 (+)
LOC110524011 LOC106613497 coding downstream 228108 52106568 ~ 52109717 (+)
LOC110524014 gnb4 coding downstream 268704 52147164 ~ 52168561 (+)
plaat1 LOC106613501 coding downstream 344368 52222828 ~ 52230021 (+)
LOC110524017 ftsj3 coding downstream 351635 52230095 ~ 52235296 (+)
G412913 NA non-coding upstream 1443 51876439 ~ 51876732 (+)
G412914 NA non-coding upstream 12061 51865893 ~ 51866114 (+)
G412907 NA non-coding upstream 20089 51857863 ~ 51858086 (+)
G412892 NA non-coding upstream 39411 51838460 ~ 51838764 (+)
G412888 NA non-coding upstream 49713 51828119 ~ 51828462 (+)
G412944 NA non-coding downstream 28748 51907208 ~ 51913927 (+)
G413126 NA non-coding downstream 142746 52021206 ~ 52081034 (+)
G413163 NA non-coding downstream 197836 52076296 ~ 52119450 (+)
G413202 acl6b non-coding downstream 253559 52132019 ~ 52133846 (+)
G413206 NA non-coding downstream 258065 52136525 ~ 52137993 (+)
G412859 NA other upstream 75355 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 739791 51059834 ~ 51153381 (+)
G411519 NA other upstream 1214535 50662872 ~ 50663640 (+)
LOC110523996 hcn1 other upstream 1954577 49889400 ~ 50073258 (+)
G409191 NA other upstream 2896404 48948138 ~ 48981771 (+)
G414007 NA other downstream 882929 52761389 ~ 52761729 (+)
G414041 NA other downstream 900057 52778517 ~ 52779479 (+)
G414488 LOC106562530 other downstream 1233723 53112183 ~ 53112507 (+)
G415582 LOC106584099 other downstream 2299469 54177929 ~ 54183430 (+)
G415808 NA other downstream 2450735 54329195 ~ 54329780 (+)

Expression


Co-expression Network