G413919


Basic Information

Item Value
gene id G413919
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 52703476 ~ 52703698 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU469236
ATTCATTATTAGTGCAAACACTAGATGACTGGAGACATTAGTTTGGGTGGTGTGTATTTAGGAACCATCCATTTTCTATTGCAAGATAATTAATAGTACaaacagaagaaaaaaatccaaaaTGGTGGCTTGTTGAATTAATACTCGGACCAGGTAAGAAACAAAGCCAACTGGGTTTGTTTTCTAGGTGTGAGTTAGGGAACAACTGCTTTACACATTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469236 True 223 lncRNA 0.36 1 52703476 52703698

Neighbor

gene id symbol gene type direction distance location
LOC110524018 LOC105026225 coding upstream 440420 52254713 ~ 52263056 (+)
LOC118964618 NA coding upstream 454581 52246773 ~ 52248895 (+)
LOC110524017 ftsj3 coding upstream 468180 52230095 ~ 52235296 (+)
plaat1 LOC106613501 coding upstream 473455 52222828 ~ 52230021 (+)
LOC110524014 gnb4 coding upstream 534915 52147164 ~ 52168561 (+)
LOC118964714 NA coding downstream 172022 52875720 ~ 52896117 (+)
opa1 LOC106613511 coding downstream 700071 53403769 ~ 53462256 (+)
LOC110524030 LOC106613513 coding downstream 912829 53616527 ~ 53618565 (+)
LOC110524032 LOC106613514 coding downstream 1063072 53766770 ~ 53801558 (+)
LOC110524034 LOC106613518 coding downstream 1124257 53827955 ~ 53923888 (+)
G413377 NA non-coding upstream 264397 52438790 ~ 52439079 (+)
G413358 NA non-coding upstream 301072 52402197 ~ 52402404 (+)
G413342 NA non-coding upstream 326388 52376686 ~ 52377088 (+)
G413206 NA non-coding upstream 565483 52136525 ~ 52137993 (+)
G413202 acl6b non-coding upstream 569630 52132019 ~ 52133846 (+)
G413959 NA non-coding downstream 27457 52731155 ~ 52731519 (+)
G413969 NA non-coding downstream 33014 52736712 ~ 52738078 (+)
G414089 NA non-coding downstream 108548 52812246 ~ 52812492 (+)
G414095 NA non-coding downstream 111313 52815011 ~ 52815225 (+)
G414107 NA non-coding downstream 121047 52824745 ~ 52825290 (+)
G412859 NA other upstream 900656 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 1565092 51059834 ~ 51153381 (+)
G411519 NA other upstream 2039836 50662872 ~ 50663640 (+)
LOC110523996 hcn1 other upstream 2779878 49889400 ~ 50073258 (+)
G409191 NA other upstream 3721705 48948138 ~ 48981771 (+)
G414007 NA other downstream 57691 52761389 ~ 52761729 (+)
G414041 NA other downstream 74819 52778517 ~ 52779479 (+)
G414488 LOC106562530 other downstream 408485 53112183 ~ 53112507 (+)
G415582 LOC106584099 other downstream 1474231 54177929 ~ 54183430 (+)
G415808 NA other downstream 1625497 54329195 ~ 54329780 (+)

Expression


Co-expression Network