Gene
RNA
| Item | Value |
|---|---|
| gene id | G413969 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 52736712 ~ 52738078 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU469286 | True | 514 | lncRNA | 0.48 | 2 | 52736712 | 52738078 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524018 | LOC105026225 | coding | upstream | 473656 | 52254713 ~ 52263056 (+) |
| LOC118964618 | NA | coding | upstream | 487817 | 52246773 ~ 52248895 (+) |
| LOC110524017 | ftsj3 | coding | upstream | 501416 | 52230095 ~ 52235296 (+) |
| plaat1 | LOC106613501 | coding | upstream | 506691 | 52222828 ~ 52230021 (+) |
| LOC110524014 | gnb4 | coding | upstream | 568151 | 52147164 ~ 52168561 (+) |
| LOC118964714 | NA | coding | downstream | 137642 | 52875720 ~ 52896117 (+) |
| opa1 | LOC106613511 | coding | downstream | 665691 | 53403769 ~ 53462256 (+) |
| LOC110524030 | LOC106613513 | coding | downstream | 878449 | 53616527 ~ 53618565 (+) |
| LOC110524032 | LOC106613514 | coding | downstream | 1028692 | 53766770 ~ 53801558 (+) |
| LOC110524034 | LOC106613518 | coding | downstream | 1089877 | 53827955 ~ 53923888 (+) |
| G413959 | NA | non-coding | upstream | 5193 | 52731155 ~ 52731519 (+) |
| G413919 | NA | non-coding | upstream | 33014 | 52703476 ~ 52703698 (+) |
| G413377 | NA | non-coding | upstream | 297633 | 52438790 ~ 52439079 (+) |
| G413358 | NA | non-coding | upstream | 334308 | 52402197 ~ 52402404 (+) |
| G413342 | NA | non-coding | upstream | 359624 | 52376686 ~ 52377088 (+) |
| G414089 | NA | non-coding | downstream | 74168 | 52812246 ~ 52812492 (+) |
| G414095 | NA | non-coding | downstream | 76933 | 52815011 ~ 52815225 (+) |
| G414107 | NA | non-coding | downstream | 86667 | 52824745 ~ 52825290 (+) |
| G414121 | NA | non-coding | downstream | 96682 | 52834760 ~ 52834964 (+) |
| G414223 | NA | non-coding | downstream | 172235 | 52910313 ~ 52910530 (+) |
| G412859 | NA | other | upstream | 933892 | 51802250 ~ 51802820 (+) |
| camsap2a | camsap2 | other | upstream | 1598328 | 51059834 ~ 51153381 (+) |
| G411519 | NA | other | upstream | 2073072 | 50662872 ~ 50663640 (+) |
| LOC110523996 | hcn1 | other | upstream | 2813114 | 49889400 ~ 50073258 (+) |
| G409191 | NA | other | upstream | 3754941 | 48948138 ~ 48981771 (+) |
| G414007 | NA | other | downstream | 23311 | 52761389 ~ 52761729 (+) |
| G414041 | NA | other | downstream | 40439 | 52778517 ~ 52779479 (+) |
| G414488 | LOC106562530 | other | downstream | 374105 | 53112183 ~ 53112507 (+) |
| G415582 | LOC106584099 | other | downstream | 1439851 | 54177929 ~ 54183430 (+) |
| G415808 | NA | other | downstream | 1591117 | 54329195 ~ 54329780 (+) |
