Gene
RNA
| Item | Value |
|---|---|
| gene id | G414101 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 52819019 ~ 52819244 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Zgc:113274 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU469420 | True | 226 | lncRNA | 0.41 | 1 | 52819019 | 52819244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptprsa | LOC106613507 | coding | downstream | 130973 | 52404727 ~ 52688046 (-) |
| LOC110524020 | LOC106613504 | coding | downstream | 445618 | 52351810 ~ 52373401 (-) |
| LOC110524019 | LOC106613502 | coding | downstream | 532309 | 52264521 ~ 52286710 (-) |
| LOC110524016 | LOC100380721 | coding | downstream | 619171 | 52172054 ~ 52199848 (-) |
| actl6a | acl6b | coding | downstream | 672623 | 52132002 ~ 52146396 (-) |
| kdm4b | LOC101448002 | coding | upstream | 426901 | 53246145 ~ 53333935 (-) |
| LOC110524026 | LOC106613510 | coding | upstream | 515089 | 53334333 ~ 53376599 (-) |
| LOC118964771 | NA | coding | upstream | 525836 | 53345080 ~ 53345217 (-) |
| LOC110522968 | LOC106613459 | coding | upstream | 904146 | 53723390 ~ 53734904 (-) |
| LOC118964619 | LOC106613459 | coding | upstream | 921400 | 53740644 ~ 53745563 (-) |
| G414078 | NA | non-coding | downstream | 14426 | 52804255 ~ 52804593 (-) |
| G414067 | NA | non-coding | downstream | 27374 | 52791184 ~ 52791645 (-) |
| G414031 | NA | non-coding | downstream | 45290 | 52773408 ~ 52773729 (-) |
| G414022 | NA | non-coding | downstream | 49043 | 52769701 ~ 52769976 (-) |
| G414005 | NA | non-coding | downstream | 58732 | 52758559 ~ 52760287 (-) |
| G414176 | NA | non-coding | upstream | 56881 | 52876125 ~ 52876363 (-) |
| G414186 | NA | non-coding | upstream | 69288 | 52888532 ~ 52888744 (-) |
| G414199 | NA | non-coding | upstream | 77771 | 52897015 ~ 52897286 (-) |
| G414209 | NA | non-coding | upstream | 82943 | 52902187 ~ 52902536 (-) |
| G414263 | NA | non-coding | upstream | 124371 | 52943615 ~ 52943974 (-) |
| G412613 | NA | other | downstream | 1206457 | 51558378 ~ 51612562 (-) |
| G412372 | NA | other | downstream | 1441889 | 51373465 ~ 51377130 (-) |
| LOC110524003 | LOC106613485 | other | downstream | 1634244 | 51179758 ~ 51228505 (-) |
| G411930 | NA | other | downstream | 2094942 | 50723159 ~ 50724077 (-) |
| G411929 | NA | other | downstream | 2095958 | 50722314 ~ 50723061 (-) |
| G415256 | LOC106613513 | other | upstream | 798439 | 53617683 ~ 53618864 (-) |
| G415420 | NA | other | upstream | 1071516 | 53890760 ~ 53892906 (-) |
| G415464 | nexn | other | upstream | 1184487 | 54002448 ~ 54005673 (-) |
| G416110 | NA | other | upstream | 1544042 | 54363286 ~ 54392411 (-) |
| LOC110524071 | LOC106613554 | other | upstream | 2322071 | 55123617 ~ 55181458 (-) |
