G414107


Basic Information

Item Value
gene id G414107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 52824745 ~ 52825290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU469426
ggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgtgaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttgacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgtttaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttccagggggccgaatactttcgcaaggcactgtatatata

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469426 True 546 lncRNA 0.39 1 52824745 52825290

Neighbor

gene id symbol gene type direction distance location
LOC110524018 LOC105026225 coding upstream 561689 52254713 ~ 52263056 (+)
LOC118964618 NA coding upstream 575850 52246773 ~ 52248895 (+)
LOC110524017 ftsj3 coding upstream 589449 52230095 ~ 52235296 (+)
plaat1 LOC106613501 coding upstream 594724 52222828 ~ 52230021 (+)
LOC110524014 gnb4 coding upstream 656184 52147164 ~ 52168561 (+)
LOC118964714 NA coding downstream 50430 52875720 ~ 52896117 (+)
opa1 LOC106613511 coding downstream 578479 53403769 ~ 53462256 (+)
LOC110524030 LOC106613513 coding downstream 791237 53616527 ~ 53618565 (+)
LOC110524032 LOC106613514 coding downstream 941480 53766770 ~ 53801558 (+)
LOC110524034 LOC106613518 coding downstream 1002665 53827955 ~ 53923888 (+)
G414095 NA non-coding upstream 9520 52815011 ~ 52815225 (+)
G414089 NA non-coding upstream 12253 52812246 ~ 52812492 (+)
G413969 NA non-coding upstream 86667 52736712 ~ 52738078 (+)
G413959 NA non-coding upstream 93226 52731155 ~ 52731519 (+)
G413919 NA non-coding upstream 121047 52703476 ~ 52703698 (+)
G414121 NA non-coding downstream 9470 52834760 ~ 52834964 (+)
G414223 NA non-coding downstream 85023 52910313 ~ 52910530 (+)
G414228 NA non-coding downstream 88801 52914091 ~ 52914359 (+)
G414251 NA non-coding downstream 110447 52935737 ~ 52935959 (+)
G414257 NA non-coding downstream 113450 52938740 ~ 52938966 (+)
G414041 NA other upstream 45266 52778517 ~ 52779479 (+)
G414007 NA other upstream 63016 52761389 ~ 52761729 (+)
G412859 NA other upstream 1021925 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 1686361 51059834 ~ 51153381 (+)
G411519 NA other upstream 2161105 50662872 ~ 50663640 (+)
G414488 LOC106562530 other downstream 286893 53112183 ~ 53112507 (+)
G415582 LOC106584099 other downstream 1352639 54177929 ~ 54183430 (+)
G415808 NA other downstream 1503905 54329195 ~ 54329780 (+)
G415809 NA other downstream 1504790 54330080 ~ 54330480 (+)
mutyh mutyh other downstream 1521246 54346481 ~ 54395448 (+)

Expression


Co-expression Network