G415000


Basic Information

Item Value
gene id G415000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 53561969 ~ 53562241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU470370
tatatggacggaatgaatcgaacaaaaggaccatttgtgatgtttatgggacatattggagttttgtgtcgtgcctgcagggttgaaatatgttttctctcttttgtttacggaggtgctatcctcagataatagcatcgtttgctttcgccgaaaagcctttttgaaatctgacatgttggctggattcacaacacgtgtagctttaatttggtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU470370 True 217 lncRNA 0.40 2 53561969 53562241

Neighbor

gene id symbol gene type direction distance location
opa1 LOC106613511 coding upstream 99713 53403769 ~ 53462256 (+)
LOC118964714 NA coding upstream 665852 52875720 ~ 52896117 (+)
LOC110524018 LOC105026225 coding upstream 1298913 52254713 ~ 52263056 (+)
LOC118964618 NA coding upstream 1313074 52246773 ~ 52248895 (+)
LOC110524017 ftsj3 coding upstream 1326673 52230095 ~ 52235296 (+)
LOC110524030 LOC106613513 coding downstream 54286 53616527 ~ 53618565 (+)
LOC110524032 LOC106613514 coding downstream 204529 53766770 ~ 53801558 (+)
LOC110524034 LOC106613518 coding downstream 265714 53827955 ~ 53923888 (+)
LOC110524036 LOC106573996 coding downstream 367025 53929266 ~ 53940832 (+)
LOC110524040 LOC106613524 coding downstream 388589 53950830 ~ 53961823 (+)
G414985 LOC106613263 non-coding upstream 12281 53548751 ~ 53549688 (+)
G414984 NA non-coding upstream 13569 53548193 ~ 53548400 (+)
G414761 NA non-coding upstream 52054 53509516 ~ 53509915 (+)
G414698 NA non-coding upstream 195864 53365836 ~ 53366105 (+)
G414684 NA non-coding upstream 203710 53351156 ~ 53358259 (+)
G415006 NA non-coding downstream 3449 53565690 ~ 53565894 (+)
G415013 NA non-coding downstream 6706 53568947 ~ 53569219 (+)
G415029 NA non-coding downstream 19346 53581587 ~ 53581956 (+)
G415038 NA non-coding downstream 28701 53590942 ~ 53591162 (+)
G415040 NA non-coding downstream 30005 53592246 ~ 53592459 (+)
G414488 LOC106562530 other upstream 449462 53112183 ~ 53112507 (+)
G414041 NA other upstream 782490 52778517 ~ 52779479 (+)
G414007 NA other upstream 800240 52761389 ~ 52761729 (+)
G412859 NA other upstream 1759149 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 2423585 51059834 ~ 51153381 (+)
G415582 LOC106584099 other downstream 615688 54177929 ~ 54183430 (+)
G415808 NA other downstream 766954 54329195 ~ 54329780 (+)
G415809 NA other downstream 767839 54330080 ~ 54330480 (+)
mutyh mutyh other downstream 784295 54346481 ~ 54395448 (+)
G415946 NA other downstream 1027833 54590074 ~ 54613142 (+)

Expression


Co-expression Network