Gene
RNA
| Item | Value |
|---|---|
| gene id | G415027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 53580796 ~ 53581010 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU470397 | True | 215 | lncRNA | 0.59 | 1 | 53580796 | 53581010 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524026 | LOC106613510 | coding | downstream | 204197 | 53334333 ~ 53376599 (-) |
| LOC118964771 | NA | coding | downstream | 235579 | 53345080 ~ 53345217 (-) |
| kdm4b | LOC101448002 | coding | downstream | 246861 | 53246145 ~ 53333935 (-) |
| ptprsa | LOC106613507 | coding | downstream | 892750 | 52404727 ~ 52688046 (-) |
| LOC110524020 | LOC106613504 | coding | downstream | 1207395 | 52351810 ~ 52373401 (-) |
| LOC110522968 | LOC106613459 | coding | upstream | 142380 | 53723390 ~ 53734904 (-) |
| LOC118964619 | LOC106613459 | coding | upstream | 159634 | 53740644 ~ 53745563 (-) |
| LOC110524031 | LOC106613515 | coding | upstream | 165848 | 53746858 ~ 53750268 (-) |
| ccdc181 | ccdc181 | coding | upstream | 341797 | 53922807 ~ 53928736 (-) |
| prrg1 | LOC106613522 | coding | upstream | 359933 | 53940943 ~ 53945602 (-) |
| G415024 | NA | non-coding | downstream | 1435 | 53576345 ~ 53579361 (-) |
| G415014 | NA | non-coding | downstream | 11580 | 53568928 ~ 53569216 (-) |
| G414978 | NA | non-coding | downstream | 35556 | 53545007 ~ 53545240 (-) |
| G414973 | NA | non-coding | downstream | 39485 | 53541097 ~ 53541311 (-) |
| G414937 | NA | non-coding | downstream | 118573 | 53460484 ~ 53462223 (-) |
| G415245 | NA | non-coding | upstream | 14586 | 53595596 ~ 53595808 (-) |
| G415274 | NA | non-coding | upstream | 90126 | 53671136 ~ 53671350 (-) |
| G415278 | NA | non-coding | upstream | 108552 | 53689562 ~ 53689771 (-) |
| G415280 | NA | non-coding | upstream | 118273 | 53699283 ~ 53699659 (-) |
| G415282 | NA | non-coding | upstream | 121874 | 53702884 ~ 53703142 (-) |
| G412613 | NA | other | downstream | 1968234 | 51558378 ~ 51612562 (-) |
| G412372 | NA | other | downstream | 2203666 | 51373465 ~ 51377130 (-) |
| LOC110524003 | LOC106613485 | other | downstream | 2396021 | 51179758 ~ 51228505 (-) |
| G411930 | NA | other | downstream | 2856719 | 50723159 ~ 50724077 (-) |
| G411929 | NA | other | downstream | 2857735 | 50722314 ~ 50723061 (-) |
| G415256 | LOC106613513 | other | upstream | 36673 | 53617683 ~ 53618864 (-) |
| G415420 | NA | other | upstream | 309750 | 53890760 ~ 53892906 (-) |
| G415464 | nexn | other | upstream | 422721 | 54002448 ~ 54005673 (-) |
| G416110 | NA | other | upstream | 782276 | 54363286 ~ 54392411 (-) |
| LOC110524071 | LOC106613554 | other | upstream | 1560305 | 55123617 ~ 55181458 (-) |
