G415274



Basic Information


Item Value
gene id G415274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 53671136 ~ 53671350 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU470659
tgtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacagacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagta

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU470659 True 215 lncRNA 0.43 1 53671136 53671350

Neighbor


gene id symbol gene type direction distance location
LOC110524026 LOC106613510 coding downstream 294537 53334333 ~ 53376599 (-)
LOC118964771 NA coding downstream 325919 53345080 ~ 53345217 (-)
kdm4b LOC101448002 coding downstream 337201 53246145 ~ 53333935 (-)
ptprsa LOC106613507 coding downstream 983090 52404727 ~ 52688046 (-)
LOC110524020 LOC106613504 coding downstream 1297735 52351810 ~ 52373401 (-)
LOC110522968 LOC106613459 coding upstream 52040 53723390 ~ 53734904 (-)
LOC118964619 LOC106613459 coding upstream 69294 53740644 ~ 53745563 (-)
LOC110524031 LOC106613515 coding upstream 75508 53746858 ~ 53750268 (-)
ccdc181 ccdc181 coding upstream 251457 53922807 ~ 53928736 (-)
prrg1 LOC106613522 coding upstream 269593 53940943 ~ 53945602 (-)
G415245 NA non-coding downstream 75328 53595596 ~ 53595808 (-)
G415027 NA non-coding downstream 90126 53580796 ~ 53581010 (-)
G415024 NA non-coding downstream 91775 53576345 ~ 53579361 (-)
G415014 NA non-coding downstream 101920 53568928 ~ 53569216 (-)
G414978 NA non-coding downstream 125896 53545007 ~ 53545240 (-)
G415278 NA non-coding upstream 18212 53689562 ~ 53689771 (-)
G415280 NA non-coding upstream 27933 53699283 ~ 53699659 (-)
G415282 NA non-coding upstream 31534 53702884 ~ 53703142 (-)
G415291 NA non-coding upstream 41383 53712733 ~ 53713033 (-)
G415296 NA non-coding upstream 45343 53716693 ~ 53717039 (-)
G415256 LOC106613513 other downstream 52272 53617683 ~ 53618864 (-)
G412613 NA other downstream 2058574 51558378 ~ 51612562 (-)
G412372 NA other downstream 2294006 51373465 ~ 51377130 (-)
LOC110524003 LOC106613485 other downstream 2486361 51179758 ~ 51228505 (-)
G411930 NA other downstream 2947059 50723159 ~ 50724077 (-)
G415420 NA other upstream 219410 53890760 ~ 53892906 (-)
G415464 nexn other upstream 332381 54002448 ~ 54005673 (-)
G416110 NA other upstream 691936 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 1469965 55123617 ~ 55181458 (-)
G417527 NA other upstream 1937485 55608835 ~ 55609730 (-)

Expression



Co-expression Network