G415282



Basic Information


Item Value
gene id G415282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 53702884 ~ 53703142 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU470667
GGACAAATTcccttatatgtgtattaaagtagtcaaaagtgtaatatttggtcccatattcctaacatgcaatgactacatcaagcttgtgactctacaaacttgttggatgcattttccatttgttttggttgtgtttgagATTATTTTGTGCCAAAGAAATTCATGCTAAATATTGTATCGTGTCATTTTGGACTAATTTATATTGTAAAAAAGAAtaaaatatgtttctgaacacttcctACATTTAATGTGGATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU470667 True 259 lncRNA 0.31 1 53702884 53703142

Neighbor


gene id symbol gene type direction distance location
LOC110524026 LOC106613510 coding downstream 326285 53334333 ~ 53376599 (-)
LOC118964771 NA coding downstream 357667 53345080 ~ 53345217 (-)
kdm4b LOC101448002 coding downstream 368949 53246145 ~ 53333935 (-)
ptprsa LOC106613507 coding downstream 1014838 52404727 ~ 52688046 (-)
LOC110524020 LOC106613504 coding downstream 1329483 52351810 ~ 52373401 (-)
LOC110522968 LOC106613459 coding upstream 20248 53723390 ~ 53734904 (-)
LOC118964619 LOC106613459 coding upstream 37502 53740644 ~ 53745563 (-)
LOC110524031 LOC106613515 coding upstream 43716 53746858 ~ 53750268 (-)
ccdc181 ccdc181 coding upstream 219665 53922807 ~ 53928736 (-)
prrg1 LOC106613522 coding upstream 237801 53940943 ~ 53945602 (-)
G415280 NA non-coding downstream 3225 53699283 ~ 53699659 (-)
G415278 NA non-coding downstream 13113 53689562 ~ 53689771 (-)
G415274 NA non-coding downstream 31534 53671136 ~ 53671350 (-)
G415245 NA non-coding downstream 107076 53595596 ~ 53595808 (-)
G415027 NA non-coding downstream 121874 53580796 ~ 53581010 (-)
G415291 NA non-coding upstream 9591 53712733 ~ 53713033 (-)
G415296 NA non-coding upstream 13551 53716693 ~ 53717039 (-)
G415297 NA non-coding upstream 14624 53717766 ~ 53718203 (-)
G415347 NA non-coding upstream 102894 53806036 ~ 53806257 (-)
G415353 NA non-coding upstream 107858 53811000 ~ 53811226 (-)
G415256 LOC106613513 other downstream 84020 53617683 ~ 53618864 (-)
G412613 NA other downstream 2090322 51558378 ~ 51612562 (-)
G412372 NA other downstream 2325754 51373465 ~ 51377130 (-)
LOC110524003 LOC106613485 other downstream 2518109 51179758 ~ 51228505 (-)
G411930 NA other downstream 2978807 50723159 ~ 50724077 (-)
G415420 NA other upstream 187618 53890760 ~ 53892906 (-)
G415464 nexn other upstream 300589 54002448 ~ 54005673 (-)
G416110 NA other upstream 660144 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 1438173 55123617 ~ 55181458 (-)
G417527 NA other upstream 1905693 55608835 ~ 55609730 (-)

Expression



Co-expression Network