Gene
RNA
| Item | Value |
|---|---|
| gene id | G415420 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 53890760 ~ 53892906 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| prolyl 3-hydroxylase 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU470822 | True | 448 | TUCP | 0.60 | 3 | 53890760 | 53892906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524031 | LOC106613515 | coding | downstream | 140492 | 53746858 ~ 53750268 (-) |
| LOC118964619 | LOC106613459 | coding | downstream | 145197 | 53740644 ~ 53745563 (-) |
| LOC110522968 | LOC106613459 | coding | downstream | 155856 | 53723390 ~ 53734904 (-) |
| LOC110524026 | LOC106613510 | coding | downstream | 514161 | 53334333 ~ 53376599 (-) |
| LOC118964771 | NA | coding | downstream | 545543 | 53345080 ~ 53345217 (-) |
| ccdc181 | ccdc181 | coding | upstream | 29901 | 53922807 ~ 53928736 (-) |
| prrg1 | LOC106613522 | coding | upstream | 48037 | 53940943 ~ 53945602 (-) |
| LOC110524038 | LOC106613526 | coding | upstream | 69036 | 53961942 ~ 53989222 (-) |
| LOC110524044 | NA | coding | upstream | 141597 | 54034503 ~ 54048020 (-) |
| LOC110524046 | LOC106613532 | coding | upstream | 276051 | 54168957 ~ 54193614 (-) |
| G415393 | NA | non-coding | downstream | 35951 | 53854280 ~ 53854809 (-) |
| G415363 | NA | non-coding | downstream | 64176 | 53826216 ~ 53826584 (-) |
| G415353 | NA | non-coding | downstream | 79534 | 53811000 ~ 53811226 (-) |
| G415347 | NA | non-coding | downstream | 84503 | 53806036 ~ 53806257 (-) |
| G415297 | NA | non-coding | downstream | 172557 | 53717766 ~ 53718203 (-) |
| G415439 | NA | non-coding | upstream | 45262 | 53938168 ~ 53939299 (-) |
| G415460 | NA | non-coding | upstream | 101113 | 53994019 ~ 53994561 (-) |
| G415464 | nexn | non-coding | upstream | 109542 | 54002448 ~ 54005673 (-) |
| G415468 | NA | non-coding | upstream | 115233 | 54008139 ~ 54008478 (-) |
| G415256 | LOC106613513 | other | downstream | 271896 | 53617683 ~ 53618864 (-) |
| G412613 | NA | other | downstream | 2278198 | 51558378 ~ 51612562 (-) |
| G412372 | NA | other | downstream | 2513630 | 51373465 ~ 51377130 (-) |
| LOC110524003 | LOC106613485 | other | downstream | 2705985 | 51179758 ~ 51228505 (-) |
| G411930 | NA | other | downstream | 3166683 | 50723159 ~ 50724077 (-) |
| G416110 | NA | other | upstream | 470380 | 54363286 ~ 54392411 (-) |
| LOC110524071 | LOC106613554 | other | upstream | 1248409 | 55123617 ~ 55181458 (-) |
| G417527 | NA | other | upstream | 1715929 | 55608835 ~ 55609730 (-) |
| LOC110522975 | LOC106613586 | other | upstream | 2815892 | 56703896 ~ 56711499 (-) |
