G415460


Basic Information

Item Value
gene id G415460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 53994019 ~ 53994561 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU470863
CTCACCTCTTGTTTCAGAGCCACTTCAGATATGTTCTGTAACTggtctttctcttcttcctctttttCATTGTCCATGTCGTGAGCCACACCATTTTGTGCCTCATCCTTCTTGTCCTTCCTCGATCTTGACCTTTGCATCGGCTTGTCCTTTGCCGTGCCATTTTCCCTGTGCTCCACCTCACTCATGTCGTGTGCCTCATCTTCCTCGTCCTCCTCAGGCTCTGTGTGAACCTCGTCCTCTTCGGTGTGAACCTCTTCCTCATTCTCGCTAAGTGCCTCGTCATGCTTGTCACGTGGGGCATCGTCCTCTTTGTGTGCCCCGAGACCGCGCCACTCGGTCGCGACGTCGCCATGCGCGTTCTCATCCGCATCGGGTGCCGCGTCACTCGTGTCGCGTGCCACATCGTTCAGGCCGTGTGCCACATCAGTCATGTCGTATGCGACATCCGCAACATTCTGTGCCACCTCAGTCATGTCTGCGCCACTCTGACAAATTGACAAGGTCCTCTTCAAATGTTAC

Function

NR:

description
nexilin-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU470863 True 522 lncRNA 0.54 2 53994019 53994561

Neighbor

gene id symbol gene type direction distance location
LOC110524038 LOC106613526 coding downstream 18901 53961942 ~ 53989222 (-)
prrg1 LOC106613522 coding downstream 48417 53940943 ~ 53945602 (-)
ccdc181 ccdc181 coding downstream 65283 53922807 ~ 53928736 (-)
LOC110524031 LOC106613515 coding downstream 243751 53746858 ~ 53750268 (-)
LOC118964619 LOC106613459 coding downstream 248456 53740644 ~ 53745563 (-)
LOC110524044 NA coding upstream 39942 54034503 ~ 54048020 (-)
LOC110524046 LOC106613532 coding upstream 174396 54168957 ~ 54193614 (-)
LOC110522970 LOC106613460 coding upstream 205629 54200190 ~ 54249220 (-)
LOC110522871 LOC106613983 coding upstream 303232 54297793 ~ 54301057 (-)
LOC110522971 NA coding upstream 307419 54301980 ~ 54305832 (-)
G415439 NA non-coding downstream 54720 53938168 ~ 53939299 (-)
G415393 NA non-coding downstream 139210 53854280 ~ 53854809 (-)
G415363 NA non-coding downstream 167435 53826216 ~ 53826584 (-)
G415353 NA non-coding downstream 182793 53811000 ~ 53811226 (-)
G415464 nexn non-coding upstream 7887 54002448 ~ 54005673 (-)
G415468 NA non-coding upstream 13578 54008139 ~ 54008478 (-)
G415475 NA non-coding upstream 16272 54010833 ~ 54011038 (-)
G415477 NA non-coding upstream 17385 54011946 ~ 54012151 (-)
G415540 NA non-coding upstream 80361 54074922 ~ 54075202 (-)
G415420 NA other downstream 101113 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 375155 53617683 ~ 53618864 (-)
G412613 NA other downstream 2381457 51558378 ~ 51612562 (-)
G412372 NA other downstream 2616889 51373465 ~ 51377130 (-)
LOC110524003 LOC106613485 other downstream 2809244 51179758 ~ 51228505 (-)
G416110 NA other upstream 368725 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 1146754 55123617 ~ 55181458 (-)
G417527 NA other upstream 1614274 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 2714237 56703896 ~ 56711499 (-)

Expression


Co-expression Network