G415474


Basic Information

Item Value
gene id G415474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54010591 ~ 54010880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU470882
gttctacattttttgaatggggcatgcttatttaagatgttgaggaaagcacttttaaagaataaccaggcatcctctactgatggaaagaggtccttccaggatacccgggccaggtagattagaaaggcctgctcgctgaagtgttttagggagagtttgacagtgatgagggttggtcgtttgaccgcggacccattacggatgcaggcaatgaggcagtgatcgctgagatcctggttgaatacagcagaggtgtatttagagggcaggttggtcaggaatatcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU470882 True 290 lncRNA 0.47 1 54010591 54010880

Neighbor

gene id symbol gene type direction distance location
LOC110524041 LOC106613525 coding upstream 5385 53991256 ~ 54005206 (+)
LOC110524039 LOC106613527 coding upstream 34359 53973591 ~ 53976232 (+)
LOC110524040 LOC106613524 coding upstream 48768 53950830 ~ 53961823 (+)
LOC110524036 LOC106573996 coding upstream 69759 53929266 ~ 53940832 (+)
LOC110524034 LOC106613518 coding upstream 86703 53827955 ~ 53923888 (+)
LOC118964527 NA coding downstream 5731 54016607 ~ 54018708 (+)
LOC110524043 NA coding downstream 9065 54019945 ~ 54024504 (+)
zgc:153738 LOC106613531 coding downstream 38159 54049039 ~ 54057375 (+)
obscna LOC106613530 coding downstream 72475 54083355 ~ 54168958 (+)
mutyh mutyh coding downstream 335601 54346481 ~ 54395448 (+)
G415467 NA non-coding upstream 2493 54007887 ~ 54008098 (+)
G415144 NA non-coding upstream 60943 53948635 ~ 53949648 (+)
G415189 NA non-coding upstream 183372 53826979 ~ 53827219 (+)
G415182 NA non-coding upstream 193499 53816853 ~ 53817092 (+)
G415117 NA non-coding upstream 282981 53727409 ~ 53727610 (+)
G415543 NA non-coding downstream 66756 54077636 ~ 54077904 (+)
G415547 NA non-coding downstream 68589 54079469 ~ 54079672 (+)
G415550 NA non-coding downstream 70745 54081625 ~ 54081866 (+)
G415552 LOC106613532 non-coding downstream 158237 54169117 ~ 54175086 (+)
G414488 LOC106562530 other upstream 898084 53112183 ~ 53112507 (+)
G414041 NA other upstream 1231112 52778517 ~ 52779479 (+)
G414007 NA other upstream 1248862 52761389 ~ 52761729 (+)
G412859 NA other upstream 2207771 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 2872207 51059834 ~ 51153381 (+)
G415582 LOC106584099 other downstream 167049 54177929 ~ 54183430 (+)
G415808 NA other downstream 318315 54329195 ~ 54329780 (+)
G415809 NA other downstream 319200 54330080 ~ 54330480 (+)
G415946 NA other downstream 579194 54590074 ~ 54613142 (+)

Expression


Co-expression Network