G415477



Basic Information


Item Value
gene id G415477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54011946 ~ 54012151 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU470885
TCTACTAGCTTTTCTGAATGTTGTGTCCCctgctcgcctagcgtagtagtgactaccgaaTGGCACCCTGATTCACCTGTTACTGCActtttgaccctatgatcactcagctacacagctgatgccccctggactgtttcaataacacggtaCCTAATTTTGTTcacctgtcggccccagcctcgaactcaggtcctgcatgtacc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU470885 True 206 lncRNA 0.50 1 54011946 54012151

Neighbor


gene id symbol gene type direction distance location
LOC110524038 LOC106613526 coding downstream 36828 53961942 ~ 53989222 (-)
prrg1 LOC106613522 coding downstream 66344 53940943 ~ 53945602 (-)
ccdc181 ccdc181 coding downstream 83210 53922807 ~ 53928736 (-)
LOC110524031 LOC106613515 coding downstream 261678 53746858 ~ 53750268 (-)
LOC118964619 LOC106613459 coding downstream 266383 53740644 ~ 53745563 (-)
LOC110524044 NA coding upstream 22352 54034503 ~ 54048020 (-)
LOC110524046 LOC106613532 coding upstream 156806 54168957 ~ 54193614 (-)
LOC110522970 LOC106613460 coding upstream 188039 54200190 ~ 54249220 (-)
LOC110522871 LOC106613983 coding upstream 285642 54297793 ~ 54301057 (-)
LOC110522971 NA coding upstream 289829 54301980 ~ 54305832 (-)
G415475 NA non-coding downstream 908 54010833 ~ 54011038 (-)
G415468 NA non-coding downstream 3468 54008139 ~ 54008478 (-)
G415464 nexn non-coding downstream 6273 54002448 ~ 54005673 (-)
G415460 NA non-coding downstream 17385 53994019 ~ 53994561 (-)
G415540 NA non-coding upstream 62771 54074922 ~ 54075202 (-)
G415546 NA non-coding upstream 67032 54079183 ~ 54079454 (-)
G415551 NA non-coding upstream 70166 54082317 ~ 54082529 (-)
G415649 LOC106613530 non-coding upstream 100895 54113046 ~ 54116394 (-)
G415652 NA non-coding upstream 101823 54113974 ~ 54117277 (-)
G415420 NA other downstream 119040 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 393082 53617683 ~ 53618864 (-)
G412613 NA other downstream 2399384 51558378 ~ 51612562 (-)
G412372 NA other downstream 2634816 51373465 ~ 51377130 (-)
G416110 NA other upstream 351135 54363286 ~ 54392411 (-)
LOC110524071 LOC106613554 other upstream 1129164 55123617 ~ 55181458 (-)
G417527 NA other upstream 1596684 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 2696647 56703896 ~ 56711499 (-)
G418830 NA other upstream 2821875 56834026 ~ 56834595 (-)

Expression



Co-expression Network