G415543


Basic Information

Item Value
gene id G415543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54077636 ~ 54077904 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU470959
atttgtattctgtacaggcttccttcttttcactctgtcaattaggttagtattgtggagtaactacaatgttgttgatccatcctcagttttctcctatcacagcctttaaactctgtaactgttttaaagtcaaatcaatagtcaaatcaaattttattggtcgcatacacatatttagcagatgttattgcgggtgtagtgaaatgcttgtgttcctagctacaACAtagcagcaatatctaacaatacacacaaatgtaaaatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU470959 True 269 lncRNA 0.34 1 54077636 54077904

Neighbor

gene id symbol gene type direction distance location
zgc:153738 LOC106613531 coding upstream 20261 54049039 ~ 54057375 (+)
LOC110524043 NA coding upstream 53132 54019945 ~ 54024504 (+)
LOC118964527 NA coding upstream 59026 54016607 ~ 54018708 (+)
LOC110524041 LOC106613525 coding upstream 72430 53991256 ~ 54005206 (+)
LOC110524039 LOC106613527 coding upstream 101404 53973591 ~ 53976232 (+)
obscna LOC106613530 coding downstream 5451 54083355 ~ 54168958 (+)
mutyh mutyh coding downstream 268577 54346481 ~ 54395448 (+)
LOC110524051 LOC106613536 coding downstream 296300 54374204 ~ 54378738 (+)
dio1 dio1 coding downstream 469609 54547513 ~ 54550162 (+)
LOC110522872 LOC106613984 coding downstream 474451 54552355 ~ 54554389 (+)
G415474 NA non-coding upstream 66756 54010591 ~ 54010880 (+)
G415467 NA non-coding upstream 69538 54007887 ~ 54008098 (+)
G415144 NA non-coding upstream 127988 53948635 ~ 53949648 (+)
G415189 NA non-coding upstream 250417 53826979 ~ 53827219 (+)
G415547 NA non-coding downstream 1565 54079469 ~ 54079672 (+)
G415550 NA non-coding downstream 3721 54081625 ~ 54081866 (+)
G415552 LOC106613532 non-coding downstream 91213 54169117 ~ 54175086 (+)
G415748 NA non-coding downstream 188159 54266063 ~ 54266343 (+)
G415750 LOC106613533 non-coding downstream 230931 54308835 ~ 54312141 (+)
G414488 LOC106562530 other upstream 965129 53112183 ~ 53112507 (+)
G414041 NA other upstream 1298157 52778517 ~ 52779479 (+)
G414007 NA other upstream 1315907 52761389 ~ 52761729 (+)
G412859 NA other upstream 2274816 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 2939252 51059834 ~ 51153381 (+)
G415582 LOC106584099 other downstream 100025 54177929 ~ 54183430 (+)
G415808 NA other downstream 251291 54329195 ~ 54329780 (+)
G415809 NA other downstream 252176 54330080 ~ 54330480 (+)
G415946 NA other downstream 512170 54590074 ~ 54613142 (+)

Expression


Co-expression Network