G415547


Basic Information

Item Value
gene id G415547
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54079469 ~ 54079672 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU470963
aacccagacaagtgcattagagtgtctagttcgagaaacagatgcctcacaagtcctaatCAGCACAACCGTTCTTTAGCTGTGCTACcataattgcaaaagagttttctaatgatcaattagccttttaaaatgataaactttgattagctaacacaacgtgccattggaacacaggagtgatggttgctgataatgtagatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU470963 True 204 lncRNA 0.39 1 54079469 54079672

Neighbor

gene id symbol gene type direction distance location
zgc:153738 LOC106613531 coding upstream 22094 54049039 ~ 54057375 (+)
LOC110524043 NA coding upstream 54965 54019945 ~ 54024504 (+)
LOC118964527 NA coding upstream 60859 54016607 ~ 54018708 (+)
LOC110524041 LOC106613525 coding upstream 74263 53991256 ~ 54005206 (+)
LOC110524039 LOC106613527 coding upstream 103237 53973591 ~ 53976232 (+)
obscna LOC106613530 coding downstream 3683 54083355 ~ 54168958 (+)
mutyh mutyh coding downstream 266809 54346481 ~ 54395448 (+)
LOC110524051 LOC106613536 coding downstream 294532 54374204 ~ 54378738 (+)
dio1 dio1 coding downstream 467841 54547513 ~ 54550162 (+)
LOC110522872 LOC106613984 coding downstream 472683 54552355 ~ 54554389 (+)
G415543 NA non-coding upstream 1565 54077636 ~ 54077904 (+)
G415474 NA non-coding upstream 68589 54010591 ~ 54010880 (+)
G415467 NA non-coding upstream 71371 54007887 ~ 54008098 (+)
G415144 NA non-coding upstream 129821 53948635 ~ 53949648 (+)
G415550 NA non-coding downstream 1953 54081625 ~ 54081866 (+)
G415552 LOC106613532 non-coding downstream 89445 54169117 ~ 54175086 (+)
G415748 NA non-coding downstream 186391 54266063 ~ 54266343 (+)
G415750 LOC106613533 non-coding downstream 229163 54308835 ~ 54312141 (+)
G415807 NA non-coding downstream 248727 54328399 ~ 54328696 (+)
G414488 LOC106562530 other upstream 966962 53112183 ~ 53112507 (+)
G414041 NA other upstream 1299990 52778517 ~ 52779479 (+)
G414007 NA other upstream 1317740 52761389 ~ 52761729 (+)
G412859 NA other upstream 2276649 51802250 ~ 51802820 (+)
camsap2a camsap2 other upstream 2941085 51059834 ~ 51153381 (+)
G415582 LOC106584099 other downstream 98257 54177929 ~ 54183430 (+)
G415808 NA other downstream 249523 54329195 ~ 54329780 (+)
G415809 NA other downstream 250408 54330080 ~ 54330480 (+)
G415946 NA other downstream 510402 54590074 ~ 54613142 (+)

Expression


Co-expression Network