G416382


Basic Information

Item Value
gene id G416382
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54860147 ~ 54860415 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU471970
tgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcgcacttgttgttgattcttcacaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtaggcctaTGTAGCTTCATGTATTTGTCTTTTAAAGCTGTCATCTCGGTTTTAATTTGAAACATCTTTTTACCCTTTGCTTGTTTATaacaattgcaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU471970 True 269 lncRNA 0.35 1 54860147 54860415

Neighbor

gene id symbol gene type direction distance location
LOC110524062 LOC106613542 coding upstream 26305 54818613 ~ 54833842 (+)
LOC110524059 LOC106613985 coding upstream 143938 54702112 ~ 54716209 (+)
LOC118964715 NA coding upstream 223210 54623690 ~ 54636937 (+)
fpgt fpgt coding upstream 239810 54617524 ~ 54620337 (+)
LOC110524055 NA coding upstream 247004 54595497 ~ 54613143 (+)
LOC110524063 LOC106613544 coding downstream 7956 54868248 ~ 54876340 (+)
LOC110522972 LOC106613545 coding downstream 16448 54876863 ~ 54888523 (+)
LOC110524066 LOC106613547 coding downstream 65918 54926333 ~ 54935194 (+)
LOC110522873 LOC106613548 coding downstream 94832 54955247 ~ 54957290 (+)
LOC110524067 LOC106613550 coding downstream 171787 55032202 ~ 55041553 (+)
G416378 NA non-coding upstream 326 54859441 ~ 54859821 (+)
G416377 NA non-coding upstream 797 54859030 ~ 54859350 (+)
G416367 NA non-coding upstream 20567 54839362 ~ 54839580 (+)
G416362 NA non-coding upstream 22355 54835613 ~ 54837792 (+)
G416005 NA non-coding upstream 171265 54688582 ~ 54688882 (+)
G416384 NA non-coding downstream 1336 54861751 ~ 54862192 (+)
G416438 NA non-coding downstream 28885 54889300 ~ 54889572 (+)
G416441 NA non-coding downstream 33718 54894133 ~ 54894347 (+)
G416529 NA non-coding downstream 91439 54951854 ~ 54952065 (+)
G415946 NA other upstream 247005 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 509532 54346481 ~ 54395448 (+)
G415809 NA other upstream 529667 54330080 ~ 54330480 (+)
G415808 NA other upstream 530367 54329195 ~ 54329780 (+)
G415582 LOC106584099 other upstream 676717 54177929 ~ 54183430 (+)
G416857 NA other downstream 464230 55324645 ~ 55325271 (+)
G418077 LOC106613582 other downstream 1757475 56617890 ~ 56628617 (+)
G418119 LOC106613588 other downstream 1865770 56726185 ~ 56729821 (+)
G418251 rtca other downstream 2063509 56923924 ~ 56925176 (+)
LOC100135807 LOC106613594 other downstream 2083423 56943838 ~ 56958165 (+)

Expression


Co-expression Network