G416530


Basic Information

Item Value
gene id G416530
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 54951507 ~ 54952438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU472139
ctatggtgttgaatgccgagctgtagtcaatgaacagcattctcacataggtattcctcttgtccagatgggttagggcggtgtgcagtgtggttgagattgcatcgtctgtggacctatttgggtggtaagcaaattggagtgggtctagggtgtcaggtagggtggaggtgatatggtccttgactagtctctcaaagcacttcatgatgacggaagtgagtgctacggggcggtagtcgtttagctcagttaccttagctttcttgggaacaggaacaatggtggccctcttgaagcatgtgggaacagcagactggtatagggattgattgaatatgtccgtaaacacaccggccagctggtctgcgcatgctctgagggcgcggctggggatgccgtctgggcctgcagccttgcgagggttaacacgtttaaatgtcttactcacctcggctgcagtgaaggagagaccgcatgttttcgttgccggccgtgtcagtggcactgtattgtcctcaaagcgggcaaaaaagttatttagtctgcctgggagcaggacatcctggtccgtgactgggctggatttcttcctgtagtccgtgattgactgtagaccctgccacatgcctcttgtgtctgagccgttgaattgagattctactttgtctctgtactgacgcttagcttgtttgatagccttgcggagggaatagctgcactgtttgtattcggtcatgttaccagacaccttgccctgattaaaagcagtggttcgcgctttcagtttcacgtgaatgctgccatcaatccacggtttctggttagggaatgttttaatcgttgctatgggaacgacatcttcaacgcacgttctaatgaactcacacaccgaatcagcgtattcgtcaatgttgttgtctgacacaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU472139 True 932 lncRNA 0.50 1 54951507 54952438

Neighbor

gene id symbol gene type direction distance location
LOC110524065 elov7 coding downstream 26755 54899096 ~ 54924752 (-)
slc44a5b LOC106613541 coding downstream 181221 54717326 ~ 54770286 (-)
erich3 erich3 coding downstream 289653 54640281 ~ 54661854 (-)
ssbp3b ssbp3 coding downstream 364317 54555051 ~ 54587190 (-)
LOC110524050 LOC106613535 coding downstream 407703 54378123 ~ 54543804 (-)
LOC118964528 NA coding upstream 45248 54997686 ~ 55005447 (-)
LOC110524068 LOC100286622 coding upstream 99286 55051724 ~ 55071938 (-)
LOC110524069 LOC106613551 coding upstream 119647 55072085 ~ 55073951 (-)
si:ch211-221n20.8 LOC106613553 coding upstream 150521 55102959 ~ 55122189 (-)
LOC110524071 LOC106613554 coding upstream 171179 55123617 ~ 55181458 (-)
G416521 NA non-coding downstream 13265 54937276 ~ 54938242 (-)
G416481 NA non-coding downstream 62993 54887511 ~ 54888514 (-)
G416432 NA non-coding downstream 74815 54876456 ~ 54876692 (-)
G416427 LOC106613544 non-coding downstream 75169 54874002 ~ 54876338 (-)
G416428 NA non-coding downstream 81321 54869668 ~ 54870186 (-)
G416544 NA non-coding upstream 10616 54963054 ~ 54963291 (-)
G416545 NA non-coding upstream 11052 54963490 ~ 54963703 (-)
G416673 NA non-coding upstream 27995 54980433 ~ 54981243 (-)
G416696 NA non-coding upstream 65917 55018355 ~ 55018559 (-)
G416709 NA non-coding upstream 90393 55042831 ~ 55043076 (-)
G416110 NA other downstream 565279 54363286 ~ 54392411 (-)
G415464 nexn other downstream 945834 54002448 ~ 54005673 (-)
G415420 NA other downstream 1058601 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 1332643 53617683 ~ 53618864 (-)
G412613 NA other downstream 3338945 51558378 ~ 51612562 (-)
G417527 NA other upstream 656397 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 1756360 56703896 ~ 56711499 (-)
G418830 NA other upstream 1881588 56834026 ~ 56834595 (-)
G419603 NA other upstream 2658621 57611059 ~ 57611567 (-)

Expression


Co-expression Network