G416616


Basic Information

Item Value
gene id G416616
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55072085 ~ 55073748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU472242
TTCAACACTTAATTTACCATTTATTCACATGAACAGAGTGTGTATTTGAGGTTACAACATAGAGGTTTCGTTTAAAACCAGGTACTTGTTTCTATATCTGACAGGGAATTTCTGCCAGTAGTGCAGGGAGCTGGGTGGACTTTATTTGACAGAATGGAGAAAGTCAAAAAGCTCTTCAGTGCAGTCCTCTGCGGTCTCGGACTTGGAGCCGACCCTGGATTCGCAGTCCTCCAGTTTTGCCCGGGTGTGGATGCAGTGCTCTGCCTGTGCACACTTGTCCCGCACTGTGTCAAGGGGGTCCACcatatcttcctcctcttcttcctcctcttcATCTTCGGGTTCCCCGTTCGGGATCCCTTTCTCCTCGAAAACCATGATGTTACTACTCT

Function

NR:

description
cytochrome b-c1 complex subunit 6, mitochondrial-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU472242 True 392 lncRNA 0.48 4 55072085 55073748

Neighbor

gene id symbol gene type direction distance location
LOC110524067 LOC106613550 coding upstream 30532 55032202 ~ 55041553 (+)
LOC110522873 LOC106613548 coding upstream 114795 54955247 ~ 54957290 (+)
LOC110524066 LOC106613547 coding upstream 136891 54926333 ~ 54935194 (+)
LOC110522972 LOC106613545 coding upstream 183562 54876863 ~ 54888523 (+)
LOC110524063 LOC106613544 coding upstream 195745 54868248 ~ 54876340 (+)
LOC118964621 LOC106613552 coding downstream 9151 55082899 ~ 55097257 (+)
LOC110524073 LOC106613986 coding downstream 164119 55237867 ~ 55239661 (+)
LOC110524074 tal1 coding downstream 176129 55242498 ~ 55255113 (+)
LOC110524076 LOC106613559 coding downstream 183926 55257674 ~ 55268360 (+)
LOC110524077 tm2d1 coding downstream 414072 55487820 ~ 55504741 (+)
G416589 NA non-coding upstream 50559 55021314 ~ 55021526 (+)
G416560 NA non-coding upstream 53891 54974659 ~ 55018194 (+)
G416529 NA non-coding upstream 120020 54951854 ~ 54952065 (+)
G416441 NA non-coding upstream 177738 54894133 ~ 54894347 (+)
G416438 NA non-coding upstream 182513 54889300 ~ 54889572 (+)
G416789 NA non-coding downstream 104810 55178558 ~ 55178825 (+)
G416790 NA non-coding downstream 105189 55178937 ~ 55179196 (+)
G416791 NA non-coding downstream 106744 55180492 ~ 55182626 (+)
G416821 NA non-coding downstream 144006 55217754 ~ 55218712 (+)
G415946 NA other upstream 458943 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 721470 54346481 ~ 54395448 (+)
G415809 NA other upstream 741605 54330080 ~ 54330480 (+)
G415808 NA other upstream 742305 54329195 ~ 54329780 (+)
G415582 LOC106584099 other upstream 888655 54177929 ~ 54183430 (+)
G416857 NA other downstream 250897 55324645 ~ 55325271 (+)
G418077 LOC106613582 other downstream 1544142 56617890 ~ 56628617 (+)
G418119 LOC106613588 other downstream 1652437 56726185 ~ 56729821 (+)
G418251 rtca other downstream 1850176 56923924 ~ 56925176 (+)
LOC100135807 LOC106613594 other downstream 1870090 56943838 ~ 56958165 (+)

Expression


Co-expression Network