G416777



Basic Information


Item Value
gene id G416777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55166453 ~ 55166685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU472416
gtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtcggatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggattTAAACTTCATCacgacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttgacg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU472416 True 233 lncRNA 0.45 1 55166453 55166685

Neighbor


gene id symbol gene type direction distance location
si:ch211-221n20.8 LOC106613553 coding downstream 44264 55102959 ~ 55122189 (-)
LOC110524069 LOC106613551 coding downstream 92502 55072085 ~ 55073951 (-)
LOC110524068 LOC100286622 coding downstream 94515 55051724 ~ 55071938 (-)
LOC118964528 NA coding downstream 161006 54997686 ~ 55005447 (-)
LOC110524065 elov7 coding downstream 241701 54899096 ~ 54924752 (-)
LOC110524072 LOC106613556 coding upstream 15929 55182614 ~ 55236572 (-)
LOC118964623 NA coding upstream 81448 55248133 ~ 55250837 (-)
LOC110522973 patj coding upstream 101761 55268446 ~ 55489840 (-)
LOC110524078 nfia coding upstream 383936 55546163 ~ 55726193 (-)
nphs2 LOC106613567 coding upstream 704515 55871200 ~ 55875392 (-)
G416761 NA non-coding downstream 18101 55148079 ~ 55148352 (-)
G416744 NA non-coding downstream 53252 55112757 ~ 55113201 (-)
G416733 NA non-coding downstream 69156 55094943 ~ 55097297 (-)
G416778 NA non-coding upstream 480 55167165 ~ 55167470 (-)
G417386 NA non-coding upstream 70403 55237088 ~ 55237467 (-)
G417357 NA non-coding upstream 84855 55251540 ~ 55255098 (-)
G417397 NA non-coding upstream 110078 55276763 ~ 55279968 (-)
LOC110524071 LOC106613554 other downstream 6186 55123617 ~ 55181458 (-)
G416110 NA other downstream 780225 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1160780 54002448 ~ 54005673 (-)
G415420 NA other downstream 1273547 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 1547589 53617683 ~ 53618864 (-)
G417527 NA other upstream 442150 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 1542113 56703896 ~ 56711499 (-)
G418830 NA other upstream 1667341 56834026 ~ 56834595 (-)
G419603 NA other upstream 2444374 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 2453369 57612040 ~ 57627128 (-)

Expression



Co-expression Network