G416778



Basic Information


Item Value
gene id G416778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55167165 ~ 55167470 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU472417
gccaccttttgcagcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagatttttctttatgttttggatcattatcttgttggaagacaaatctccgtcccag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU472417 True 306 lncRNA 0.42 1 55167165 55167470

Neighbor


gene id symbol gene type direction distance location
si:ch211-221n20.8 LOC106613553 coding downstream 44976 55102959 ~ 55122189 (-)
LOC110524069 LOC106613551 coding downstream 93214 55072085 ~ 55073951 (-)
LOC110524068 LOC100286622 coding downstream 95227 55051724 ~ 55071938 (-)
LOC118964528 NA coding downstream 161718 54997686 ~ 55005447 (-)
LOC110524065 elov7 coding downstream 242413 54899096 ~ 54924752 (-)
LOC110524072 LOC106613556 coding upstream 15144 55182614 ~ 55236572 (-)
LOC118964623 NA coding upstream 80663 55248133 ~ 55250837 (-)
LOC110522973 patj coding upstream 100976 55268446 ~ 55489840 (-)
LOC110524078 nfia coding upstream 383151 55546163 ~ 55726193 (-)
nphs2 LOC106613567 coding upstream 703730 55871200 ~ 55875392 (-)
G416777 NA non-coding downstream 480 55166453 ~ 55166685 (-)
G416761 NA non-coding downstream 18813 55148079 ~ 55148352 (-)
G416744 NA non-coding downstream 53964 55112757 ~ 55113201 (-)
G416733 NA non-coding downstream 69868 55094943 ~ 55097297 (-)
G417386 NA non-coding upstream 69618 55237088 ~ 55237467 (-)
G417357 NA non-coding upstream 84070 55251540 ~ 55255098 (-)
G417397 NA non-coding upstream 109293 55276763 ~ 55279968 (-)
G417401 NA non-coding upstream 128233 55295703 ~ 55301442 (-)
LOC110524071 LOC106613554 other downstream 6898 55123617 ~ 55181458 (-)
G416110 NA other downstream 780937 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1161492 54002448 ~ 54005673 (-)
G415420 NA other downstream 1274259 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 1548301 53617683 ~ 53618864 (-)
G417527 NA other upstream 441365 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 1541328 56703896 ~ 56711499 (-)
G418830 NA other upstream 1666556 56834026 ~ 56834595 (-)
G419603 NA other upstream 2443589 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 2452584 57612040 ~ 57627128 (-)

Expression



Co-expression Network