Gene
RNA
| Item | Value |
|---|---|
| gene id | G416821 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55217754 ~ 55218712 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| FYVE and coiled-coil domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU472478 | True | 269 | lncRNA | 0.54 | 2 | 55217754 | 55218712 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964621 | LOC106613552 | coding | upstream | 120497 | 55082899 ~ 55097257 (+) |
| LOC110524067 | LOC106613550 | coding | upstream | 176201 | 55032202 ~ 55041553 (+) |
| LOC110522873 | LOC106613548 | coding | upstream | 260464 | 54955247 ~ 54957290 (+) |
| LOC110524066 | LOC106613547 | coding | upstream | 282560 | 54926333 ~ 54935194 (+) |
| LOC110522972 | LOC106613545 | coding | upstream | 329231 | 54876863 ~ 54888523 (+) |
| LOC110524073 | LOC106613986 | coding | downstream | 19155 | 55237867 ~ 55239661 (+) |
| LOC110524074 | tal1 | coding | downstream | 31165 | 55242498 ~ 55255113 (+) |
| LOC110524076 | LOC106613559 | coding | downstream | 38962 | 55257674 ~ 55268360 (+) |
| LOC110524077 | tm2d1 | coding | downstream | 269108 | 55487820 ~ 55504741 (+) |
| LOC110522974 | LOC106613563 | coding | downstream | 549264 | 55767976 ~ 55826824 (+) |
| G416791 | NA | non-coding | upstream | 35128 | 55180492 ~ 55182626 (+) |
| G416790 | NA | non-coding | upstream | 38558 | 55178937 ~ 55179196 (+) |
| G416789 | NA | non-coding | upstream | 38929 | 55178558 ~ 55178825 (+) |
| G416616 | NA | non-coding | upstream | 144006 | 55072085 ~ 55073748 (+) |
| G416589 | NA | non-coding | upstream | 196228 | 55021314 ~ 55021526 (+) |
| G416823 | NA | non-coding | downstream | 49740 | 55268452 ~ 55271810 (+) |
| G416859 | NA | non-coding | downstream | 55979 | 55274691 ~ 55317707 (+) |
| G416856 | NA | non-coding | downstream | 68963 | 55287675 ~ 55318979 (+) |
| G415946 | NA | other | upstream | 604612 | 54590074 ~ 54613142 (+) |
| mutyh | mutyh | other | upstream | 867139 | 54346481 ~ 54395448 (+) |
| G415809 | NA | other | upstream | 887274 | 54330080 ~ 54330480 (+) |
| G415808 | NA | other | upstream | 887974 | 54329195 ~ 54329780 (+) |
| G415582 | LOC106584099 | other | upstream | 1034324 | 54177929 ~ 54183430 (+) |
| G416857 | NA | other | downstream | 105933 | 55324645 ~ 55325271 (+) |
| G418077 | LOC106613582 | other | downstream | 1399178 | 56617890 ~ 56628617 (+) |
| G418119 | LOC106613588 | other | downstream | 1507473 | 56726185 ~ 56729821 (+) |
| G418251 | rtca | other | downstream | 1705212 | 56923924 ~ 56925176 (+) |
| LOC100135807 | LOC106613594 | other | downstream | 1725126 | 56943838 ~ 56958165 (+) |
