G417405


Basic Information

Item Value
gene id G417405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55310898 ~ 55317130 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473129
ctctctttctcactcctttctctgtctccctctcccgctctctctctcgctctcccgctctttttcactcattccccttttctctctctctttttcactccttcctctctctctctcccgctctctttttcactccttcctctctctctctctcctgctctttttcactccttcctctctctctcccactctctttctcactccttcccctttctctctctctcccgctctctttctcactcctttctctctctctctctcccgctctctctctctcgctctcccgctcGTTTTCACTcattccccttttctctctctctttttcactccttcctctctctctcccactctctttttcactcctttctctctctctcccgctctctttttcaatccttcctctctcccgctctctttttcactccttcctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcccgctctctttctcactccttcccctttctctctctctctctctccgctctctttctcactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473129 True 557 lncRNA 0.51 2 55310898 55317130

Neighbor

gene id symbol gene type direction distance location
LOC118964623 NA coding downstream 60935 55248133 ~ 55250837 (-)
LOC110524072 LOC106613556 coding downstream 74326 55182614 ~ 55236572 (-)
LOC110524071 LOC106613554 coding downstream 129440 55123617 ~ 55181458 (-)
si:ch211-221n20.8 LOC106613553 coding downstream 188709 55102959 ~ 55122189 (-)
LOC110524069 LOC106613551 coding downstream 236947 55072085 ~ 55073951 (-)
LOC110524078 nfia coding upstream 233491 55546163 ~ 55726193 (-)
nphs2 LOC106613567 coding upstream 554070 55871200 ~ 55875392 (-)
LOC110524086 LOC106613573 coding upstream 788472 56105602 ~ 56136576 (-)
LOC118964529 NA coding upstream 894608 56211738 ~ 56214599 (-)
LOC110524088 LOC106613575 coding upstream 923601 56240731 ~ 56383335 (-)
G417401 NA non-coding downstream 9456 55295703 ~ 55301442 (-)
G417397 NA non-coding downstream 30930 55276763 ~ 55279968 (-)
G417357 NA non-coding downstream 55800 55251540 ~ 55255098 (-)
G417386 NA non-coding downstream 73431 55237088 ~ 55237467 (-)
G417362 NA non-coding upstream 83188 55400318 ~ 55405920 (-)
G417445 NA non-coding upstream 120999 55438129 ~ 55441958 (-)
LOC110522973 patj non-coding upstream 170824 55268446 ~ 55489840 (-)
G417465 NA non-coding upstream 180952 55498082 ~ 55499624 (-)
G417487 NA non-coding upstream 208538 55525668 ~ 55525908 (-)
G416110 NA other downstream 924670 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1305225 54002448 ~ 54005673 (-)
G415420 NA other downstream 1417992 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 1692034 53617683 ~ 53618864 (-)
G417527 NA other upstream 291705 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 1391668 56703896 ~ 56711499 (-)
G418830 NA other upstream 1516896 56834026 ~ 56834595 (-)
G419603 NA other upstream 2293929 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 2302924 57612040 ~ 57627128 (-)

Expression


Co-expression Network