Gene
RNA
| Item | Value |
|---|---|
| gene id | G416945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55417131 ~ 55417724 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU472625 | True | 260 | lncRNA | 0.43 | 2 | 55417131 | 55417724 |
55,415,600
55,416,000
55,416,400
55,416,800
55,417,200
55,417,600
55,418,000
55,418,000
55,418,400
55,418,800
55,419,200
55,419,600
55,420,000
55,420,400
NC_048569.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524076 | LOC106613559 | coding | upstream | 148771 | 55257674 ~ 55268360 (+) |
| LOC110524074 | tal1 | coding | upstream | 162018 | 55242498 ~ 55255113 (+) |
| LOC110524073 | LOC106613986 | coding | upstream | 177470 | 55237867 ~ 55239661 (+) |
| LOC118964621 | LOC106613552 | coding | upstream | 319874 | 55082899 ~ 55097257 (+) |
| LOC110524067 | LOC106613550 | coding | upstream | 375578 | 55032202 ~ 55041553 (+) |
| LOC110524077 | tm2d1 | coding | downstream | 70096 | 55487820 ~ 55504741 (+) |
| LOC110522974 | LOC106613563 | coding | downstream | 350252 | 55767976 ~ 55826824 (+) |
| LOC110524079 | atpaf1 | coding | downstream | 409483 | 55827207 ~ 55838164 (+) |
| LOC110524081 | rab3b | coding | downstream | 420836 | 55838512 ~ 55848072 (+) |
| LOC110524082 | LOC106613566 | coding | downstream | 431489 | 55849213 ~ 55864861 (+) |
| G416893 | NA | non-coding | upstream | 55297 | 55357389 ~ 55361834 (+) |
| G416856 | NA | non-coding | upstream | 98152 | 55287675 ~ 55318979 (+) |
| G416859 | NA | non-coding | upstream | 99424 | 55274691 ~ 55317707 (+) |
| G416823 | NA | non-coding | upstream | 145321 | 55268452 ~ 55271810 (+) |
| G416941 | patj | non-coding | downstream | 10487 | 55428211 ~ 55452917 (+) |
| G416944 | NA | non-coding | downstream | 15707 | 55433431 ~ 55443491 (+) |
| G416942 | NA | non-coding | downstream | 35413 | 55453137 ~ 55453482 (+) |
| G416969 | patj | non-coding | downstream | 46388 | 55464112 ~ 55465118 (+) |
| G417009 | NA | non-coding | downstream | 106003 | 55523727 ~ 55524289 (+) |
| G416857 | NA | other | upstream | 91860 | 55324645 ~ 55325271 (+) |
| G415946 | NA | other | upstream | 803989 | 54590074 ~ 54613142 (+) |
| mutyh | mutyh | other | upstream | 1066516 | 54346481 ~ 54395448 (+) |
| G415809 | NA | other | upstream | 1086651 | 54330080 ~ 54330480 (+) |
| G415808 | NA | other | upstream | 1087351 | 54329195 ~ 54329780 (+) |
| G418077 | LOC106613582 | other | downstream | 1200166 | 56617890 ~ 56628617 (+) |
| G418119 | LOC106613588 | other | downstream | 1308461 | 56726185 ~ 56729821 (+) |
| G418251 | rtca | other | downstream | 1506200 | 56923924 ~ 56925176 (+) |
| LOC100135807 | LOC106613594 | other | downstream | 1526114 | 56943838 ~ 56958165 (+) |
| LOC110524119 | LOC106613607 | other | downstream | 1947640 | 57352343 ~ 57367627 (+) |
