G417505



Basic Information


Item Value
gene id G417505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55560787 ~ 55561035 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU473255
GCCCAGTCCTTTAGTTCCCTCTATACAAAGGgcaagcagaacagaacagacagataaGACCTTTAATAGGCTCTTGTACTTCGTGTCAATTTGCTCCCAGTGAAGAGTCTACTGCGATGGCCCACAAACACCAGCCAGCATCATTgtggtggcacacacacacacacacacacacacacagagacagtcgcCTCACAGCCACTTCTCTCTGAATATAGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU473255 True 219 lncRNA 0.49 2 55560787 55561035

Neighbor


gene id symbol gene type direction distance location
LOC110522973 patj coding downstream 72820 55268446 ~ 55489840 (-)
LOC118964623 NA coding downstream 310824 55248133 ~ 55250837 (-)
LOC110524072 LOC106613556 coding downstream 324215 55182614 ~ 55236572 (-)
LOC110524071 LOC106613554 coding downstream 379329 55123617 ~ 55181458 (-)
si:ch211-221n20.8 LOC106613553 coding downstream 438598 55102959 ~ 55122189 (-)
nphs2 LOC106613567 coding upstream 310165 55871200 ~ 55875392 (-)
LOC110524086 LOC106613573 coding upstream 544567 56105602 ~ 56136576 (-)
LOC118964529 NA coding upstream 650703 56211738 ~ 56214599 (-)
LOC110524088 LOC106613575 coding upstream 679696 56240731 ~ 56383335 (-)
LOC110524089 LOC106613577 coding upstream 895080 56456115 ~ 56459513 (-)
G417487 NA non-coding downstream 34879 55525668 ~ 55525908 (-)
G417465 NA non-coding downstream 61163 55498082 ~ 55499624 (-)
G417445 NA non-coding downstream 118829 55438129 ~ 55441958 (-)
G417362 NA non-coding downstream 154867 55400318 ~ 55405920 (-)
G417522 NA non-coding upstream 36916 55597951 ~ 55598873 (-)
G417528 NA non-coding upstream 50307 55611342 ~ 55611882 (-)
G417583 NA non-coding upstream 172781 55733816 ~ 55735222 (-)
G417584 NA non-coding upstream 174239 55735274 ~ 55738366 (-)
G417589 NA non-coding upstream 187664 55748699 ~ 55748913 (-)
G416110 NA other downstream 1174559 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1555114 54002448 ~ 54005673 (-)
G415420 NA other downstream 1667881 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 1941923 53617683 ~ 53618864 (-)
G417527 NA other upstream 47800 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 1147763 56703896 ~ 56711499 (-)
G418830 NA other upstream 1272991 56834026 ~ 56834595 (-)
G419603 NA other upstream 2050024 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 2059019 57612040 ~ 57627128 (-)

Expression



Co-expression Network