G417522



Basic Information


Item Value
gene id G417522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55597951 ~ 55598873 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU473273
acacacacacgttttagaaacaatacacacacacacacgttttagcagcaacacacacacacgttttagtaacaacacacacacacacacacgttttagcagcaacacacacacacgttttagcAGCCACAAACACACGTTTTagccacaatacacacacacacacgttttagcagcaacacaaacacacacacacatttttgaaACAACTCACACACACGTTTTAGCAACAATACCCACACACGTTTTGGAAACAATGTACACACGTTTTagcaataatacacacacacacac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU473273 True 294 lncRNA 0.41 2 55597951 55598873

Neighbor


gene id symbol gene type direction distance location
LOC110522973 patj coding downstream 109984 55268446 ~ 55489840 (-)
LOC118964623 NA coding downstream 347988 55248133 ~ 55250837 (-)
LOC110524072 LOC106613556 coding downstream 361379 55182614 ~ 55236572 (-)
LOC110524071 LOC106613554 coding downstream 416493 55123617 ~ 55181458 (-)
si:ch211-221n20.8 LOC106613553 coding downstream 475762 55102959 ~ 55122189 (-)
nphs2 LOC106613567 coding upstream 272327 55871200 ~ 55875392 (-)
LOC110524086 LOC106613573 coding upstream 506729 56105602 ~ 56136576 (-)
LOC118964529 NA coding upstream 612865 56211738 ~ 56214599 (-)
LOC110524088 LOC106613575 coding upstream 641858 56240731 ~ 56383335 (-)
LOC110524089 LOC106613577 coding upstream 857242 56456115 ~ 56459513 (-)
LOC110524078 nfia non-coding downstream 11939 55546163 ~ 55726193 (-)
G417505 NA non-coding downstream 36916 55560787 ~ 55561035 (-)
G417487 NA non-coding downstream 72043 55525668 ~ 55525908 (-)
G417465 NA non-coding downstream 98327 55498082 ~ 55499624 (-)
G417528 NA non-coding upstream 12469 55611342 ~ 55611882 (-)
G417583 NA non-coding upstream 134943 55733816 ~ 55735222 (-)
G417584 NA non-coding upstream 136401 55735274 ~ 55738366 (-)
G417589 NA non-coding upstream 149826 55748699 ~ 55748913 (-)
G417598 NA non-coding upstream 169769 55768642 ~ 55769071 (-)
G416110 NA other downstream 1211723 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1592278 54002448 ~ 54005673 (-)
G415420 NA other downstream 1705045 53890760 ~ 53892906 (-)
G415256 LOC106613513 other downstream 1979087 53617683 ~ 53618864 (-)
G417527 NA other upstream 9962 55608835 ~ 55609730 (-)
LOC110522975 LOC106613586 other upstream 1109925 56703896 ~ 56711499 (-)
G418830 NA other upstream 1235153 56834026 ~ 56834595 (-)
G419603 NA other upstream 2012186 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 2021181 57612040 ~ 57627128 (-)

Expression



Co-expression Network