Gene
RNA
| Item | Value |
|---|---|
| gene id | G417527 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55608835 ~ 55609730 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cell wall protein AWA1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU473281 | True | 761 | TUCP | 0.45 | 2 | 55608835 | 55609730 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522973 | patj | coding | downstream | 120868 | 55268446 ~ 55489840 (-) |
| LOC118964623 | NA | coding | downstream | 358872 | 55248133 ~ 55250837 (-) |
| LOC110524072 | LOC106613556 | coding | downstream | 372263 | 55182614 ~ 55236572 (-) |
| LOC110524071 | LOC106613554 | coding | downstream | 427377 | 55123617 ~ 55181458 (-) |
| si:ch211-221n20.8 | LOC106613553 | coding | downstream | 486646 | 55102959 ~ 55122189 (-) |
| nphs2 | LOC106613567 | coding | upstream | 261470 | 55871200 ~ 55875392 (-) |
| LOC110524086 | LOC106613573 | coding | upstream | 495872 | 56105602 ~ 56136576 (-) |
| LOC118964529 | NA | coding | upstream | 602008 | 56211738 ~ 56214599 (-) |
| LOC110524088 | LOC106613575 | coding | upstream | 631001 | 56240731 ~ 56383335 (-) |
| LOC110524089 | LOC106613577 | coding | upstream | 846385 | 56456115 ~ 56459513 (-) |
| G417522 | NA | non-coding | downstream | 9962 | 55597951 ~ 55598873 (-) |
| LOC110524078 | nfia | non-coding | downstream | 22823 | 55546163 ~ 55726193 (-) |
| G417505 | NA | non-coding | downstream | 47800 | 55560787 ~ 55561035 (-) |
| G417487 | NA | non-coding | downstream | 82927 | 55525668 ~ 55525908 (-) |
| G417465 | NA | non-coding | downstream | 109211 | 55498082 ~ 55499624 (-) |
| G417528 | NA | non-coding | upstream | 1612 | 55611342 ~ 55611882 (-) |
| G417583 | NA | non-coding | upstream | 124086 | 55733816 ~ 55735222 (-) |
| G417584 | NA | non-coding | upstream | 125544 | 55735274 ~ 55738366 (-) |
| G417589 | NA | non-coding | upstream | 138969 | 55748699 ~ 55748913 (-) |
| G417598 | NA | non-coding | upstream | 158912 | 55768642 ~ 55769071 (-) |
| G416110 | NA | other | downstream | 1222607 | 54363286 ~ 54392411 (-) |
| G415464 | nexn | other | downstream | 1603162 | 54002448 ~ 54005673 (-) |
| G415420 | NA | other | downstream | 1715929 | 53890760 ~ 53892906 (-) |
| G415256 | LOC106613513 | other | downstream | 1989971 | 53617683 ~ 53618864 (-) |
| LOC110522975 | LOC106613586 | other | upstream | 1099068 | 56703896 ~ 56711499 (-) |
| G418830 | NA | other | upstream | 1224296 | 56834026 ~ 56834595 (-) |
| G419603 | NA | other | upstream | 2001329 | 57611059 ~ 57611567 (-) |
| LOC110524128 | LOC107602773 | other | upstream | 2010324 | 57612040 ~ 57627128 (-) |
| G419714 | NA | other | upstream | 2090015 | 57699745 ~ 57705936 (-) |
