G417528


Basic Information

Item Value
gene id G417528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55611342 ~ 55611882 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473282
GGGGTTGCGATTTAAAGAAAAGagcagtacacacagtacattaTTTAAAGAAAAGagcagtacacacagtacattaTTTAAAGAAAAGagcagtacacacagtacattaTTTAAAGAAAAGagcagtacacacagtacattaTTTAAAGAAAGGagcagtacacacagtacattaTTTAAAGAAAAGAGCAGTACACGCAGTACATTATTTAAAGAAAAGagcagtacacacagtacattaTTTAAAGAAAGGagcagtacacacagtacattaTTTAAAGAAAAGAGCAGTACACGCAGTACATTATTTAAAGAAAAGagcagtacacacagtacattaTTTAAAGAAAGGAGCAGTAcacacagtacattaTTTAAAGAAAAGAGCAGTACACGCAGTACATTATTTAAAGAAAAGAGCAGTACACGCAGTACATTATTTAAAGAAAAGagcagtacacacagtacattattcaaaGAAAAGagcagtacacacagtacattattt

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473282 True 508 lncRNA 0.32 2 55611342 55611882

Neighbor

gene id symbol gene type direction distance location
LOC110522973 patj coding downstream 123375 55268446 ~ 55489840 (-)
LOC118964623 NA coding downstream 361379 55248133 ~ 55250837 (-)
LOC110524072 LOC106613556 coding downstream 374770 55182614 ~ 55236572 (-)
LOC110524071 LOC106613554 coding downstream 429884 55123617 ~ 55181458 (-)
si:ch211-221n20.8 LOC106613553 coding downstream 489153 55102959 ~ 55122189 (-)
nphs2 LOC106613567 coding upstream 259318 55871200 ~ 55875392 (-)
LOC110524086 LOC106613573 coding upstream 493720 56105602 ~ 56136576 (-)
LOC118964529 NA coding upstream 599856 56211738 ~ 56214599 (-)
LOC110524088 LOC106613575 coding upstream 628849 56240731 ~ 56383335 (-)
LOC110524089 LOC106613577 coding upstream 844233 56456115 ~ 56459513 (-)
G417522 NA non-coding downstream 12469 55597951 ~ 55598873 (-)
LOC110524078 nfia non-coding downstream 25330 55546163 ~ 55726193 (-)
G417505 NA non-coding downstream 50307 55560787 ~ 55561035 (-)
G417487 NA non-coding downstream 85434 55525668 ~ 55525908 (-)
G417465 NA non-coding downstream 111718 55498082 ~ 55499624 (-)
G417583 NA non-coding upstream 121934 55733816 ~ 55735222 (-)
G417584 NA non-coding upstream 123392 55735274 ~ 55738366 (-)
G417589 NA non-coding upstream 136817 55748699 ~ 55748913 (-)
G417598 NA non-coding upstream 156760 55768642 ~ 55769071 (-)
G417600 LOC106613563 non-coding upstream 159027 55770909 ~ 55771508 (-)
G417527 NA other downstream 1612 55608835 ~ 55609730 (-)
G416110 NA other downstream 1225114 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1605669 54002448 ~ 54005673 (-)
G415420 NA other downstream 1718436 53890760 ~ 53892906 (-)
LOC110522975 LOC106613586 other upstream 1096916 56703896 ~ 56711499 (-)
G418830 NA other upstream 1222144 56834026 ~ 56834595 (-)
G419603 NA other upstream 1999177 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 2008172 57612040 ~ 57627128 (-)
G419714 NA other upstream 2087863 57699745 ~ 57705936 (-)

Expression


Co-expression Network