G417598


Basic Information

Item Value
gene id G417598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55768642 ~ 55769071 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473352
ACCTGCAGTTGGAGCTGTCCTAAAGGTCCCTTCTCCGGCACCATCTGCACACGCTCAGAGAGGAGGGATCCtgtcacctcacacacacacacacacacactcacaaccctCCTGAAACCACGTCGTTACTGGGAAAACTCTGGCATCCCAACACAAAAAAAGGACCACAGCCGAGACAAAAGACAGGGCAAAGACCTGTGAGATAGTGAGAACAAGAGCACGCAAACACAGGGTTCTCCACGTCTGTTAGAGGTCGTCTTCCTGCCAGACTGTTGGGaagcacacagagagagtgagagagagggaagaaagagggagagagggagaaggggaaagggaagggggagagggaaaaaCTGCTTAACCTCAAAAACACAGGAAATGTGCGGAGCAGTTCCAAGAGTTTTacttctctatcgctctctcctgC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473352 True 430 lncRNA 0.52 1 55768642 55769071

Neighbor

gene id symbol gene type direction distance location
LOC110524078 nfia coding downstream 42449 55546163 ~ 55726193 (-)
LOC110522973 patj coding downstream 280675 55268446 ~ 55489840 (-)
LOC118964623 NA coding downstream 518679 55248133 ~ 55250837 (-)
LOC110524072 LOC106613556 coding downstream 532070 55182614 ~ 55236572 (-)
LOC110524071 LOC106613554 coding downstream 587184 55123617 ~ 55181458 (-)
nphs2 LOC106613567 coding upstream 102129 55871200 ~ 55875392 (-)
LOC110524086 LOC106613573 coding upstream 336531 56105602 ~ 56136576 (-)
LOC118964529 NA coding upstream 442667 56211738 ~ 56214599 (-)
LOC110524088 LOC106613575 coding upstream 471660 56240731 ~ 56383335 (-)
LOC110524089 LOC106613577 coding upstream 687044 56456115 ~ 56459513 (-)
G417589 NA non-coding downstream 19729 55748699 ~ 55748913 (-)
G417584 NA non-coding downstream 30276 55735274 ~ 55738366 (-)
G417583 NA non-coding downstream 33420 55733816 ~ 55735222 (-)
G417528 NA non-coding downstream 156760 55611342 ~ 55611882 (-)
G417522 NA non-coding downstream 169769 55597951 ~ 55598873 (-)
G417600 LOC106613563 non-coding upstream 1838 55770909 ~ 55771508 (-)
G417601 LOC106613563 non-coding upstream 3028 55772099 ~ 55772349 (-)
G417602 NA non-coding upstream 3670 55772741 ~ 55773069 (-)
G417604 LOC106613563 non-coding upstream 5270 55774341 ~ 55774674 (-)
G417611 LOC106613563 non-coding upstream 10642 55779713 ~ 55780052 (-)
G417527 NA other downstream 158912 55608835 ~ 55609730 (-)
G416110 NA other downstream 1382414 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1762969 54002448 ~ 54005673 (-)
G415420 NA other downstream 1875736 53890760 ~ 53892906 (-)
LOC110522975 LOC106613586 other upstream 939727 56703896 ~ 56711499 (-)
G418830 NA other upstream 1064955 56834026 ~ 56834595 (-)
G419603 NA other upstream 1841988 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 1850983 57612040 ~ 57627128 (-)
G419714 NA other upstream 1930674 57699745 ~ 57705936 (-)

Expression


Co-expression Network