XLOC_023423 (gpr12)


Basic Information

Item Value
gene id XLOC_023423
gene name gpr12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 21584074 ~ 21588914 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046333
GCTCACCCCTCCCAGCGCCTTTTGCACAGCCGCAGTTGGTGCTCGTGCAGACGGCGAAGAGCCGCTAGAGGAgccgctgctgctgctgtgaagaTCCTCCGGTCcggcttcatcttcatcatcatcatcacagccTCCATCCGCCCGCGCCGCGCTGCACCTGCCGACAGCGCTGCCATTAAATACAATGGAAAGATCAGAGAGACACGGAAACATCTAAAACAGACGCATCTCCTCCAACAGACAAGGAGGCAGAATGAGTGAAGAGGTGTCAGTTTCTCCAAGCTGGCTGGCTCAAGAACCCACCTGGGGCAGCAGCGGCGCGGGGAGCATAGAGAACATCACTGTGGGAACATACTCACCGGCGGTCATCCTGCCAGCGAGACCACCTACGGAGCTGCTGGTGAACCCGTGGGACATCGTACTCTGTTCATCTGGCACCCTCATCGCCTGTGAAAACGCCCTGGTGGTTTTGGTCATCTGGCAGAACCCGGCTTTACGCGCTCCGATGTTTCTACTGATCGGCAGTCTAGCTCTAGCTGACCTATTGGCTGGTTTGGGATTAGTCCTGCACTTTACTTTCGCATACCTACTGCGCTCTGATTCAGCCCAGCTGTTGACTGTAGGTCTGGTGGTGGCGTCCTTCTCCGCATCAGTTTTCAGCCTGCTGGCCATCACCATTGACCGCTACCTGTCGCTGTACTACGCCCTCACCTACAACTCCGAACGAACTGCCGCCTTCACATACACCATGCTGGTGCTTCTATGGGGCGTTTCCTTGTGTTTGGGTTTGCTCCCAGTCACCGGTGTTAACTGCTTAGGGCAGGAGGTAAACTGCAGCGTGGTGTGGCCCCTAACGAAAAACAACGTGGCCGTTTTATCCGTGTCCTTCCTTCTACTCTTCGGCCTCATGCTACAACTCTATGTGCAGATCTGCAAAATCGTCATGCGGCATGCGCACCAAATTGCCCTCCAGCACCACTTTTTAGCAGCAAGCCCTCATTACGTCACGACGCGTAAAGGCGTATCCACGCTGGCGATAATTCTGGGCACATTCGCTGCCTGCTGGATGCCGTTTACTGTATACTCGCTCATAGCCGATTATACATACCCACCGCTCTACACGTACGCCACCCTGGTGCCCGCCACCTACAACTCAGTCATCAACCCAGTCATTTACGCATTCCGCAATCAAGAGATCCAGAAAGCGTTGTGGCTGGTGTGCTGTGGATGTATCCCTGCCAGCGTGGCCCATCGGGCACGGACCCCCAGCGACGTCTGATGTAATGTGCCTAGGGAATTGCACAGGTCATGGGACAAGAAAGGGCATGTGCGTCACCCGTTTATGTCTTCCCCTAAAGCCCAAAGTATACTTTGGTTTTTACGCATATGCGAGAGTCTGCGTACACCTGAATCGTACGTTCGGATATCtgctttgaattgtttttgcGCCGCTACACTTTGGCCACAAGGTGTCAACAGTAAACATATCGGGAAAAAGTGGGATAACAAAAACACAACTTTATGAGGGGATTACAAGGCATCCAAAGAtgtattttaaagactttttggAGGAAAGATGAGCAGAAATTGGACAAGATTGAATCTTTCTTATCTGTGTAAACTTCGAAAGGTTGTATGTGCGTCTTGTGTGCgtaaaaatcaaacaaagaaGTAAACTTTGGGCTTAATTGTTATGTGACAACCACTGCCACACAATCTTTTGCCTGATCCTGTTCCAACCAGCTGCCACACCCTGTCCAGGATTTGAAAAAGGGCCGGGAATTGACGCAGTGTGGCAGGCAGCTGTAAATATCCTGTACATAAATATgcctttgcatttttttgtgcTTGTTTTGGCTTGGCCACAGCGGCAGCCCCCTGTTGCATGGGCTGTgagggaggaggaggaagatgTGGGGCAGCACGAGGCGGTCCGCTTGACTGGATCCCGAAGCTCATTCATCTCTTCCTGCTGTTGCTGCATTCAGGAACGTGCGCTGAACGTTAAGTAACCGCGGTGTGCTAAAAATAGACACGAGGCGCTCGGTGATCCGCGCCTTGCGTCCTCCATAGAAACACAGAGAGGCGCGCTTTTCTCGTCTCTTTGATTTAAATCTCAACCCGAGCGTGGCCGAATGTAAAATGTCCTCCAAAGCAGAAAAACCATGAAGAGCTAATTACAATCTCAGATCGAGAACCACTCTATAAATAACCCAACCCACGGATGCCTTTATTTTGGTTTGGATCGGAAGTGGAACTGTCACCCGTCCCGCATTCCTCTTCCATAAATGCGGGATGAAAGTGAACGGGAGCGTGGAGAAAGTGTATGTGTGGTCATTTTAAACAGTCCCCTGTGAATAGAGGCTCACTTCAAACAACTGTCGAGTACAAAACGTGCATTAAGTGTTTGAGAATAAGAGGTTTGTTTATATGCAGCAACATTGCTGAGAACAGAACCGaatgtattttcttttgattTGCTCTTAATTTGCATTGTGCTCCCAAAGCTCTGAATAGATCACTGCTCCTTTTATTAAGTTCAACTTTTAATTAATACTGGGTACAGGATGGCTGTCAAACAATGGTCATTCATAGAATTTTGCTTAAAATTTACATGTAATGCATTTGCGTAGAAGCATCAATATAAGTCAGTTAGAGGGGGTAATCTCTAATGTTAATTACAAATTTCATCCCAAAATCAAATGATTCTTTTTCAGAATTAAGCTACATAttctattatataatataattttacactgtaaaacatacaaTCTGGTTAGCTCCATCGCcggttcgagccctgactgggtcagttggcatttctgtgaggagtttgcatgttcttcctgtgttcctccgggtgctccggtttcccccactgtccaaatacttgcgctataggtgaattaggtaagatAAACCATCCGTAGTGTATGTCCTGTTTCTCCAGATTAGGTGTTGAGCGTTTGTCTAaagacccacctcataaaaactagaggttacgaaacaccaacatggtgcggctaataTCACTTTGATAAAAAcgaccctgggagtaagtaaaacATATAACCTACATTAACAGTGATTCATCTGTGAATGTTTATTAACATCTTTATACATGCTTCAAATGGTGATACCTTACTTTATACTTTAAAAGACACCTGGCAATCTTGATATATGGTGATctgttaattaatagttttttttacagtgtaatagcaTATCTCATTGAAATCTAGTAAGATCTATTGGGATAATGAGATGTAAAATtggacttgtttaaaaaaaactaaatgttttccTTTTGATTTTGGGGTGAAATGTAACCTAGACACATTTTCATGAGATTTATCAATAATATTCTCATTTGGTGATATGCCAGCCAAATTACAGTTCCACTCCCAAATGAGCTTCCCATAGATTTACTGTCAATATGATATACTGTCAGTAAACTGTTTAATCCAACCCTTActtattctgattacgtaccccatatacatttctggagagcg
>TCONS_00046334
ATGAGTGAAGAGGTGTCAGTTTCTCCAAGCTGGCTGGCTCAAGAACCCACCTGGGGCAGCAGCGGCGCGGGGAGCATAGAGAACATCACTGTGGGAACATACTCACCGGCGGTCATCCTGCCAGCGAGACCACCTACGGAGCTGCTGGTGAACCCGTGGGACATCGTACTCTGTTCATCTGGCACCCTCATCGCCTGTGAAAACGCCCTGGTGGTTTTGGTCATCTGGCAGAACCCGGCTTTACGCGCTCCGATGTTTCTACTGATCGGCAGTCTAGCTCTAGCTGACCTATTGGCTGGTTTGGGATTAGTCCTGCACTTTACTTTCGCATACCTACTGCGCTCTGATTCAGCCCAGCTGTTGACTGTAGGTCTGGTGGTGGCGTCCTTCTCCGCATCAGTTTTCAGCCTGCTGGCCATCACCATTGACCGCTACCTGTCGCTGTACTACGCCCTCACCTACAACTCCGAACGAACTGCCGCCTTCACATACACCATGCTGGTGCTTCTATGGGGCGTTTCCTTGTGTTTGGGTTTGCTCCCAGTCACCGGTGTTAACTGCTTAGGGCAGGAGGTAAACTGCAGCGTGGTGTGGCCCCTAACGAAAAACAACGTGGCCGTTTTATCCGTGTCCTTCCTTCTACTCTTCGGCCTCATGCTACAACTCTATGTGCAGATCTGCAAAATCGTCATGCGGCATGCGCACCAAATTGCCCTCCAGCACCACTTTTTAGCAGCAAGCCCTCATTACGTCACGACGCGTAAAGGCGTATCCACGCTGGCGATAATTCTGGGCACATTCGCTGCCTGCTGGATGCCGTTTACTGTATACTCGCTCATAGCCGATTATACATACCCACCGCTCTACACGTACGCCACCCTGGTGCCCGCCACCTACAACTCAGTCATCAACCCAGTCATTTACGCATTCCGCAATCAAGAGATCCAGAAAGCGTTGTGGCTGGTGTGCTGTGGATGTATCCCTGCCAGCGTGGCCCATCGGGCACGGACCCCCAGCGACGTCTGA

Function

symbol description
gpr12 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human GPR12 (G protein-coupled receptor 12).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0019222 regulation of metabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
ko01009 Protein phosphatases and associated proteins
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-100209-3 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human GPR12 (G protein-coupled receptor 12).

Ensembl:

ensembl_id ENSDARG00000062934

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046333 False 3518 mRNA 0.46 2 21584074 21588914
TCONS_00046334 True 1026 mRNA 0.55 1 21586310 21587335

Neighbor

gene id symbol gene type direction distance location
XLOC_023422 atp8a2 coding downstream 71649 21371279 ~ 21512425 (-)
XLOC_023421 spice1 coding downstream 214320 21330753 ~ 21369754 (-)
XLOC_023420 boc coding downstream 325129 21206243 ~ 21258945 (-)
XLOC_023419 atp6v1ab coding downstream 411952 21154120 ~ 21172122 (-)
XLOC_023418 gramd1c coding downstream 433905 21131874 ~ 21150169 (-)
XLOC_023424 usp12a coding upstream 11406 21600320 ~ 21620316 (-)
XLOC_023425 AL929009.3 coding upstream 14674 21603588 ~ 21637183 (-)
XLOC_023426 lnx2a coding upstream 57403 21646317 ~ 21674996 (-)
XLOC_023427 urad coding upstream 98362 21687276 ~ 21689146 (-)
XLOC_023428 flt3 coding upstream 103025 21691939 ~ 21713883 (-)
XLOC_023665 dre-mir-735 misc upstream 16589047 38177961 ~ 38178027 (-)
XLOC_023407 NA non-coding downstream 1052261 20450027 ~ 20531813 (-)
XLOC_023401 BX247944.1 non-coding downstream 1396644 20187316 ~ 20187430 (-)
XLOC_023400 NA non-coding downstream 1399049 20181997 ~ 20185025 (-)
XLOC_023398 NA non-coding downstream 1521024 20060691 ~ 20063050 (-)
XLOC_023397 CR381686.1 non-coding downstream 1529817 20032331 ~ 20054257 (-)
XLOC_023437 AL627129.1 non-coding upstream 374138 21963052 ~ 21963168 (-)
XLOC_023442 NA non-coding upstream 464895 22053809 ~ 22066831 (-)
XLOC_023445 AL590147.1 non-coding upstream 720030 22308944 ~ 22309058 (-)
XLOC_023446 CT573489.1 non-coding upstream 783072 22371986 ~ 22372100 (-)
XLOC_023448 NA non-coding upstream 1290027 22878941 ~ 23218030 (-)

Expression


Co-expression Network