Gene
RNA
| Item | Value |
|---|---|
| gene id | G417611 |
| gene name | LOC106613563 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55779713 ~ 55780052 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| FRAS1-related extracellular matrix protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU473367 | True | 340 | lncRNA | 0.59 | 1 | 55779713 | 55780052 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524078 | nfia | coding | downstream | 53520 | 55546163 ~ 55726193 (-) |
| LOC110522973 | patj | coding | downstream | 291746 | 55268446 ~ 55489840 (-) |
| LOC118964623 | NA | coding | downstream | 529750 | 55248133 ~ 55250837 (-) |
| LOC110524072 | LOC106613556 | coding | downstream | 543141 | 55182614 ~ 55236572 (-) |
| LOC110524071 | LOC106613554 | coding | downstream | 598255 | 55123617 ~ 55181458 (-) |
| nphs2 | LOC106613567 | coding | upstream | 91148 | 55871200 ~ 55875392 (-) |
| LOC110524086 | LOC106613573 | coding | upstream | 325550 | 56105602 ~ 56136576 (-) |
| LOC118964529 | NA | coding | upstream | 431686 | 56211738 ~ 56214599 (-) |
| LOC110524088 | LOC106613575 | coding | upstream | 460679 | 56240731 ~ 56383335 (-) |
| LOC110524089 | LOC106613577 | coding | upstream | 676063 | 56456115 ~ 56459513 (-) |
| G417604 | LOC106613563 | non-coding | downstream | 5039 | 55774341 ~ 55774674 (-) |
| G417602 | NA | non-coding | downstream | 6644 | 55772741 ~ 55773069 (-) |
| G417601 | LOC106613563 | non-coding | downstream | 7364 | 55772099 ~ 55772349 (-) |
| G417600 | LOC106613563 | non-coding | downstream | 8205 | 55770909 ~ 55771508 (-) |
| G417598 | NA | non-coding | downstream | 10642 | 55768642 ~ 55769071 (-) |
| G417612 | LOC106613563 | non-coding | upstream | 1736 | 55781788 ~ 55782230 (-) |
| G417615 | LOC106613563 | non-coding | upstream | 6909 | 55786961 ~ 55787214 (-) |
| G417609 | rab3b | non-coding | upstream | 13532 | 55793584 ~ 55848057 (-) |
| G417650 | NA | non-coding | upstream | 56372 | 55836424 ~ 55921657 (-) |
| G417755 | NA | non-coding | upstream | 219820 | 55999872 ~ 56007111 (-) |
| G417527 | NA | other | downstream | 169983 | 55608835 ~ 55609730 (-) |
| G416110 | NA | other | downstream | 1393485 | 54363286 ~ 54392411 (-) |
| G415464 | nexn | other | downstream | 1774040 | 54002448 ~ 54005673 (-) |
| G415420 | NA | other | downstream | 1886807 | 53890760 ~ 53892906 (-) |
| LOC110522975 | LOC106613586 | other | upstream | 928746 | 56703896 ~ 56711499 (-) |
| G418830 | NA | other | upstream | 1053974 | 56834026 ~ 56834595 (-) |
| G419603 | NA | other | upstream | 1831007 | 57611059 ~ 57611567 (-) |
| LOC110524128 | LOC107602773 | other | upstream | 1840002 | 57612040 ~ 57627128 (-) |
| G419714 | NA | other | upstream | 1919693 | 57699745 ~ 57705936 (-) |
