G417650


Basic Information

Item Value
gene id G417650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55836424 ~ 55921657 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473408
GGGCTTGATTGAGCTATTTGCCTTTTAGCAGGCCATGTGTATGTGTTCTAAGTGAAGTTTTATAGGCATGTGCACTAATTAGTACAATGAAATGTCTTTATTGctttctttcccaacaatgcagtaacagtagtacaagaaaaatatttgaaaaagttgaacaaaaaacacacaaacagcaATTAGAAGTACATGAGAAAGTAGGTGAGAAAGTAAATGAGAAAGTAACTTTATACAGGGTgccagttccagggtcagtgccaataccataattacaatgtgtgtgtgtgtgtacaaaataTAGACAAAGGCATTTCAAGCAGTTATAAATCTTTAATTGTCAAATATAGCATCCTGTTGTTTAAGCATTTTCTAAAAATCCATTTTTTAATGAATAACCTTAACCAGCAGAAATTAAGAATGAAAATGTGTCCTTATGGGGCATGTAATTCTGTAGATATTCTCAATTCTCAATTGTCTAATTCATGGTCTTTGTTTTGGATTGAAAAGGCCAGATTTAAAGAAGCTTTTGAACAGACACACAACTTTCACCCCTTTTTAAGGAGCAAATAAACACCAGAAACAACAcacaaatgttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473408 True 605 lncRNA 0.33 2 55836424 55921657

Neighbor

gene id symbol gene type direction distance location
LOC110524078 nfia coding downstream 110231 55546163 ~ 55726193 (-)
LOC110522973 patj coding downstream 348457 55268446 ~ 55489840 (-)
LOC118964623 NA coding downstream 586461 55248133 ~ 55250837 (-)
LOC110524072 LOC106613556 coding downstream 599852 55182614 ~ 55236572 (-)
LOC110524071 LOC106613554 coding downstream 654966 55123617 ~ 55181458 (-)
LOC110524086 LOC106613573 coding upstream 183945 56105602 ~ 56136576 (-)
LOC118964529 NA coding upstream 290081 56211738 ~ 56214599 (-)
LOC110524088 LOC106613575 coding upstream 319074 56240731 ~ 56383335 (-)
LOC110524089 LOC106613577 coding upstream 534458 56456115 ~ 56459513 (-)
LOC110524090 LOC106613576 coding upstream 539122 56460779 ~ 56485866 (-)
G417615 LOC106613563 non-coding downstream 49210 55786961 ~ 55787214 (-)
G417612 LOC106613563 non-coding downstream 54194 55781788 ~ 55782230 (-)
G417611 LOC106613563 non-coding downstream 56372 55779713 ~ 55780052 (-)
G417604 LOC106613563 non-coding downstream 61750 55774341 ~ 55774674 (-)
G417602 NA non-coding downstream 63355 55772741 ~ 55773069 (-)
G417755 NA non-coding upstream 78215 55999872 ~ 56007111 (-)
G417771 NA non-coding upstream 119823 56041480 ~ 56121609 (-)
G418505 NA non-coding upstream 297088 56218745 ~ 56218980 (-)
G418584 NA non-coding upstream 489416 56411073 ~ 56411429 (-)
G418590 NA non-coding upstream 500681 56422338 ~ 56422619 (-)
G417527 NA other downstream 226694 55608835 ~ 55609730 (-)
G416110 NA other downstream 1450196 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1830751 54002448 ~ 54005673 (-)
G415420 NA other downstream 1943518 53890760 ~ 53892906 (-)
LOC110522975 LOC106613586 other upstream 787141 56703896 ~ 56711499 (-)
G418830 NA other upstream 912369 56834026 ~ 56834595 (-)
G419603 NA other upstream 1689402 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 1698397 57612040 ~ 57627128 (-)
G419714 NA other upstream 1778088 57699745 ~ 57705936 (-)

Expression


Co-expression Network