G417755



Basic Information


Item Value
gene id G417755
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 55999872 ~ 56007111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU473518
cccagatgggatccctagccacgtcctcagaccATGCACAgagcagctggctggtgtgttcacAGACAtattcggggcggcagggtagcctagtggttagagcgttggacttgtaaccgaaaggttgcaagttcaaatccctgagctgacaacgtacaaatctgtcgctctgcccctgaacaggcagttaacccactgttcctaggctgtcattgttatACTCTTTTACTACTG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU473518 True 234 lncRNA 0.52 2 55999872 56007111

Neighbor


gene id symbol gene type direction distance location
nphs2 LOC106613567 coding downstream 124480 55871200 ~ 55875392 (-)
LOC110524078 nfia coding downstream 273679 55546163 ~ 55726193 (-)
LOC110522973 patj coding downstream 511905 55268446 ~ 55489840 (-)
LOC118964623 NA coding downstream 749909 55248133 ~ 55250837 (-)
LOC110524072 LOC106613556 coding downstream 763300 55182614 ~ 55236572 (-)
LOC110524086 LOC106613573 coding upstream 98491 56105602 ~ 56136576 (-)
LOC118964529 NA coding upstream 204627 56211738 ~ 56214599 (-)
LOC110524088 LOC106613575 coding upstream 233620 56240731 ~ 56383335 (-)
LOC110524089 LOC106613577 coding upstream 449004 56456115 ~ 56459513 (-)
LOC110524090 LOC106613576 coding upstream 453668 56460779 ~ 56485866 (-)
G417650 NA non-coding downstream 78215 55836424 ~ 55921657 (-)
G417609 rab3b non-coding downstream 151815 55793584 ~ 55848057 (-)
G417615 LOC106613563 non-coding downstream 212658 55786961 ~ 55787214 (-)
G417612 LOC106613563 non-coding downstream 217642 55781788 ~ 55782230 (-)
G417611 LOC106613563 non-coding downstream 219820 55779713 ~ 55780052 (-)
G417771 NA non-coding upstream 34369 56041480 ~ 56121609 (-)
G418505 NA non-coding upstream 211634 56218745 ~ 56218980 (-)
G418584 NA non-coding upstream 403962 56411073 ~ 56411429 (-)
G418590 NA non-coding upstream 415227 56422338 ~ 56422619 (-)
G418599 NA non-coding upstream 428880 56435991 ~ 56436467 (-)
G417527 NA other downstream 390142 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 839605 55123617 ~ 55181458 (-)
G416110 NA other downstream 1613644 54363286 ~ 54392411 (-)
G415464 nexn other downstream 1994199 54002448 ~ 54005673 (-)
G415420 NA other downstream 2106966 53890760 ~ 53892906 (-)
LOC110522975 LOC106613586 other upstream 701687 56703896 ~ 56711499 (-)
G418830 NA other upstream 826915 56834026 ~ 56834595 (-)
G419603 NA other upstream 1603948 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 1612943 57612040 ~ 57627128 (-)
G419714 NA other upstream 1692634 57699745 ~ 57705936 (-)

Expression



Co-expression Network