G417968



Basic Information


Item Value
gene id G417968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56410170 ~ 56410401 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU473737
gtactcacatcccaccataccattgtctgtacattatgccctgaatctattctaccacacccagaaatctgctccttttaatctctgttcccaacgcactagacgaccagttcttatagcctttagccatacccttatcctactcctcctctgttcctctggtgatgtagagtatataacctcacactcaacgtcaacaaaactaaggagatgattgtggacttcaggaaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU473737 True 232 lncRNA 0.44 1 56410170 56410401

Neighbor


gene id symbol gene type direction distance location
LOC110524085 LOC106613570 coding upstream 304889 55932977 ~ 56105281 (+)
LOC110524087 LOC106613571 coding upstream 388637 56013137 ~ 56021533 (+)
LOC110524084 LOC106613569 coding upstream 489115 55884879 ~ 55921055 (+)
LOC110524082 LOC106613566 coding upstream 545309 55849213 ~ 55864861 (+)
LOC110524081 rab3b coding upstream 562098 55838512 ~ 55848072 (+)
LOC110524091 LOC106613578 coding downstream 95143 56505544 ~ 56525588 (+)
LOC110524094 LOC106613581 coding downstream 174807 56585208 ~ 56593281 (+)
stil stil coding downstream 221395 56631796 ~ 56647090 (+)
rc3h1a LOC106613585 coding downstream 248520 56658921 ~ 56688589 (+)
serpinc1 LOC106613587 coding downstream 286217 56696618 ~ 56702156 (+)
G417883 NA non-coding upstream 166379 56226865 ~ 56243791 (+)
G417882 NA non-coding upstream 166760 56240815 ~ 56243410 (+)
G417876 NA non-coding upstream 191067 56218781 ~ 56219103 (+)
G417864 NA non-coding upstream 204994 56204944 ~ 56205176 (+)
G417212 NA non-coding upstream 464887 55888037 ~ 55945283 (+)
G417969 NA non-coding downstream 1002 56411403 ~ 56411610 (+)
G417977 NA non-coding downstream 16899 56427300 ~ 56427530 (+)
G417983 NA non-coding downstream 25216 56435617 ~ 56435981 (+)
G417991 NA non-coding downstream 50383 56460784 ~ 56465861 (+)
G417989 NA non-coding downstream 60644 56471045 ~ 56473135 (+)
G416857 NA other upstream 1084899 55324645 ~ 55325271 (+)
G415946 NA other upstream 1797028 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2059555 54346481 ~ 54395448 (+)
G415809 NA other upstream 2079690 54330080 ~ 54330480 (+)
G415808 NA other upstream 2080390 54329195 ~ 54329780 (+)
G418077 LOC106613582 other downstream 207489 56617890 ~ 56628617 (+)
G418119 LOC106613588 other downstream 315784 56726185 ~ 56729821 (+)
G418251 rtca other downstream 513523 56923924 ~ 56925176 (+)
LOC100135807 LOC106613594 other downstream 533437 56943838 ~ 56958165 (+)
LOC110524119 LOC106613607 other downstream 954963 57352343 ~ 57367627 (+)

Expression



Co-expression Network