G417991



Basic Information


Item Value
gene id G417991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56460784 ~ 56465861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU473762
GTGAAAATATTTATTGAAGGCACAATTAAGAAAAGTTTAAGCTACACAGAACACTAATGACCAAAAGGGacccatttttttgtttgttttctaaCTATTTAATTGTGATGTTTGTTTTCTTTACTGAGAGGCCCAAGAGAAAAGGTCCCAAGCTAATTGTAATCAAAGTATACATGTTTCATAGATCTGAAACGATAGGTTTTATAATACCTACTTTgtgctacaaaaaaaaaaaaaaaaaaaaaaaccccTTTTCCcccccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU473762 True 263 lncRNA 0.32 2 56460784 56465861

Neighbor


gene id symbol gene type direction distance location
LOC110524085 LOC106613570 coding upstream 355503 55932977 ~ 56105281 (+)
LOC110524087 LOC106613571 coding upstream 439251 56013137 ~ 56021533 (+)
LOC110524084 LOC106613569 coding upstream 539729 55884879 ~ 55921055 (+)
LOC110524082 LOC106613566 coding upstream 595923 55849213 ~ 55864861 (+)
LOC110524081 rab3b coding upstream 612712 55838512 ~ 55848072 (+)
LOC110524091 LOC106613578 coding downstream 39683 56505544 ~ 56525588 (+)
LOC110524094 LOC106613581 coding downstream 119347 56585208 ~ 56593281 (+)
stil stil coding downstream 165935 56631796 ~ 56647090 (+)
rc3h1a LOC106613585 coding downstream 193060 56658921 ~ 56688589 (+)
serpinc1 LOC106613587 coding downstream 230757 56696618 ~ 56702156 (+)
G417983 NA non-coding upstream 24803 56435617 ~ 56435981 (+)
G417977 NA non-coding upstream 33254 56427300 ~ 56427530 (+)
G417969 NA non-coding upstream 49174 56411403 ~ 56411610 (+)
G417968 NA non-coding upstream 50383 56410170 ~ 56410401 (+)
G417883 NA non-coding upstream 216993 56226865 ~ 56243791 (+)
G417989 NA non-coding downstream 5184 56471045 ~ 56473135 (+)
G418007 LOC106613576 non-coding downstream 11902 56477763 ~ 56478566 (+)
G418063 NA non-coding downstream 128117 56593978 ~ 56594366 (+)
G418076 kiaa1614 non-coding downstream 148345 56614206 ~ 56616854 (+)
G418087 NA non-coding downstream 167992 56633853 ~ 56667606 (+)
G416857 NA other upstream 1135513 55324645 ~ 55325271 (+)
G415946 NA other upstream 1847642 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2110169 54346481 ~ 54395448 (+)
G415809 NA other upstream 2130304 54330080 ~ 54330480 (+)
G415808 NA other upstream 2131004 54329195 ~ 54329780 (+)
G418077 LOC106613582 other downstream 152029 56617890 ~ 56628617 (+)
G418119 LOC106613588 other downstream 260324 56726185 ~ 56729821 (+)
G418251 rtca other downstream 458063 56923924 ~ 56925176 (+)
LOC100135807 LOC106613594 other downstream 477977 56943838 ~ 56958165 (+)
LOC110524119 LOC106613607 other downstream 899503 57352343 ~ 57367627 (+)

Expression



Co-expression Network