Gene
RNA
| Item | Value |
|---|---|
| gene id | G418007 |
| gene name | LOC106613576 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 56477763 ~ 56478566 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU473780 | False | 431 | lncRNA | 0.55 | 3 | 56477763 | 56478566 |
| TU473781 | True | 284 | lncRNA | 0.54 | 2 | 56478117 | 56478566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524085 | LOC106613570 | coding | upstream | 372482 | 55932977 ~ 56105281 (+) |
| LOC110524087 | LOC106613571 | coding | upstream | 456230 | 56013137 ~ 56021533 (+) |
| LOC110524084 | LOC106613569 | coding | upstream | 556708 | 55884879 ~ 55921055 (+) |
| LOC110524082 | LOC106613566 | coding | upstream | 612902 | 55849213 ~ 55864861 (+) |
| LOC110524081 | rab3b | coding | upstream | 629691 | 55838512 ~ 55848072 (+) |
| LOC110524091 | LOC106613578 | coding | downstream | 26978 | 56505544 ~ 56525588 (+) |
| LOC110524094 | LOC106613581 | coding | downstream | 106642 | 56585208 ~ 56593281 (+) |
| stil | stil | coding | downstream | 153230 | 56631796 ~ 56647090 (+) |
| rc3h1a | LOC106613585 | coding | downstream | 180355 | 56658921 ~ 56688589 (+) |
| serpinc1 | LOC106613587 | coding | downstream | 218052 | 56696618 ~ 56702156 (+) |
| G417989 | NA | non-coding | upstream | 4628 | 56471045 ~ 56473135 (+) |
| G417991 | NA | non-coding | upstream | 11902 | 56460784 ~ 56465861 (+) |
| G417983 | NA | non-coding | upstream | 41782 | 56435617 ~ 56435981 (+) |
| G417977 | NA | non-coding | upstream | 50233 | 56427300 ~ 56427530 (+) |
| G417969 | NA | non-coding | upstream | 66153 | 56411403 ~ 56411610 (+) |
| G418063 | NA | non-coding | downstream | 115412 | 56593978 ~ 56594366 (+) |
| G418076 | kiaa1614 | non-coding | downstream | 135640 | 56614206 ~ 56616854 (+) |
| G418087 | NA | non-coding | downstream | 155287 | 56633853 ~ 56667606 (+) |
| G418176 | NA | non-coding | downstream | 347573 | 56826139 ~ 56826512 (+) |
| G418178 | NA | non-coding | downstream | 349105 | 56827671 ~ 56827880 (+) |
| G416857 | NA | other | upstream | 1152492 | 55324645 ~ 55325271 (+) |
| G415946 | NA | other | upstream | 1864621 | 54590074 ~ 54613142 (+) |
| mutyh | mutyh | other | upstream | 2127148 | 54346481 ~ 54395448 (+) |
| G415809 | NA | other | upstream | 2147283 | 54330080 ~ 54330480 (+) |
| G415808 | NA | other | upstream | 2147983 | 54329195 ~ 54329780 (+) |
| G418077 | LOC106613582 | other | downstream | 139324 | 56617890 ~ 56628617 (+) |
| G418119 | LOC106613588 | other | downstream | 247619 | 56726185 ~ 56729821 (+) |
| G418251 | rtca | other | downstream | 445358 | 56923924 ~ 56925176 (+) |
| LOC100135807 | LOC106613594 | other | downstream | 465272 | 56943838 ~ 56958165 (+) |
| LOC110524119 | LOC106613607 | other | downstream | 886798 | 57352343 ~ 57367627 (+) |
