G418617


Basic Information

Item Value
gene id G418617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56490748 ~ 56543373 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU474461
tcctccctcatgtggtacccttcctgcaggctcatcctgacatgaccctccagcatgacaatgccaccagccatactgctcgttctgtgcgtgatttcctgcaagacaggaatgtcagtgttctgccatggtcagtgaagagcccggatctcaatcccattgagcacatctgggacctgttggatcgaagggtgagggctagggccattccccccagaaatgtctgagaacttgcaggtgccttggtggaagagtggggtaacatctcacagcaagaaggGCAAATCTGGTGAAGTCtatgaggaagagatgcactgcagtacttaatacagctggtggccacacagggacacattattcaatttctgttagtcacatgtctgtggaacttgttcagtttatgcctcagttgttgaatcttgttatgttcatacaaatatttacacatgttaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU474461 True 454 lncRNA 0.48 2 56490748 56543373

Neighbor

gene id symbol gene type direction distance location
LOC110524090 LOC106613576 coding downstream 4882 56460779 ~ 56485866 (-)
LOC110524089 LOC106613577 coding downstream 31235 56456115 ~ 56459513 (-)
LOC110524088 LOC106613575 coding downstream 107413 56240731 ~ 56383335 (-)
LOC118964529 NA coding downstream 276149 56211738 ~ 56214599 (-)
LOC110524086 LOC106613573 coding downstream 354172 56105602 ~ 56136576 (-)
LOC110524093 LOC106613579 coding upstream 35262 56578635 ~ 56580493 (-)
si:dkey-121a11.3 LOC106613582 coding upstream 59510 56602883 ~ 56630974 (-)
LOC110522975 LOC106613586 coding upstream 160523 56703896 ~ 56711499 (-)
LOC110524100 LOC106613588 coding upstream 182801 56726174 ~ 56729842 (-)
LOC110524101 LOC106613589 coding upstream 246260 56789633 ~ 56817065 (-)
G418599 NA non-coding downstream 54281 56435991 ~ 56436467 (-)
G418590 NA non-coding downstream 68129 56422338 ~ 56422619 (-)
G418584 NA non-coding downstream 79319 56411073 ~ 56411429 (-)
G418505 NA non-coding downstream 271768 56218745 ~ 56218980 (-)
G417771 NA non-coding downstream 369139 56041480 ~ 56121609 (-)
G418679 LOC106613581 non-coding upstream 43809 56587182 ~ 56587655 (-)
G418671 NA non-coding upstream 45657 56589030 ~ 56593265 (-)
G418680 NA non-coding upstream 50575 56593948 ~ 56594224 (-)
G418686 NA non-coding upstream 56317 56599690 ~ 56600991 (-)
G418687 NA non-coding upstream 58615 56601988 ~ 56602797 (-)
G417527 NA other downstream 881018 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 1330481 55123617 ~ 55181458 (-)
G416110 NA other downstream 2104520 54363286 ~ 54392411 (-)
G415464 nexn other downstream 2485075 54002448 ~ 54005673 (-)
G415420 NA other downstream 2597842 53890760 ~ 53892906 (-)
G418830 NA other upstream 290653 56834026 ~ 56834595 (-)
G419603 NA other upstream 1067686 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 1076681 57612040 ~ 57627128 (-)
G419714 NA other upstream 1156372 57699745 ~ 57705936 (-)

Expression


Co-expression Network