G418622 (LOC106613464)


Basic Information

Item Value
gene id G418622
gene name LOC106613464
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56502541 ~ 56546662 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU474467
agagagagagagagagagagagtaaaaggggCCTTGACCAAGGCTACTGTTTATTGCGAAGATGGAGTCCTTTTTCATTGAAGTGAAATGAAAGTTAGAGAAGAAAGAGTGTTGTGAAAAGATGCCGACAAGGGGAATGTATTCGGGGACAGGTTTTTACATTGTTGTGGACAAAGTTGGTGCGGCCAAACTCGCTATTCAGGGCACTACAAACTGTCCCTTCCTGATATGAACTGCTCCGGGTGTCTGAGACATTGGAGAGTGGGGCTGGACGAACTTGTAAAGAGTGGCTTCTTGCCAGCCACCGTGACTCACCAGACCATCTTCACAGTTGACCTCTTCAAGTCCTTTGAAGACATAAAGGTGTTGGCTCCAAGATGCTCCCGTCATGCCTTTGTGGGAATGCTTGACGAAAGAACAAATCACTTTGGCAGAAGTGGAAAGAAATGTGGCGGCACATTCCAGAAGGCATTCCTCGAGTGGAAGTAGGGCGTTTGGAAATAACCAAGCTTTGTGGAAGCGATCTCCTCCATTGTCCTGCCTGCTCACAGGAGATGCATGCGATATCAGTGGATGGGAATTGTAAGCAATACCGCTTCCAGAATGCCTCAGGGTTTGTACTACCTTCTTATGtgttgatgttttgttcagggtATAATTATGCCTTCTTAAAGTGCATGCTGGTCGTCTTTTTGGGATGAAGTATATGTTTGCAGTGTTATATTGCAGTTGGTCTTCTTTTTAGAAGAACATTAATTGTCAAGTAGAAGGTCATTTCCCATTCAGAAAAATTGTGGAACGGTGACATTTCCTTCTTTATCCCAACTCCTccgagacacgcacacacacacacacacacacacacagacacacacacac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613464

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU474467 True 879 lncRNA 0.45 3 56502541 56546662

Neighbor

gene id symbol gene type direction distance location
LOC110524090 LOC106613576 coding downstream 16675 56460779 ~ 56485866 (-)
LOC110524089 LOC106613577 coding downstream 43028 56456115 ~ 56459513 (-)
LOC110524088 LOC106613575 coding downstream 119206 56240731 ~ 56383335 (-)
LOC118964529 NA coding downstream 287942 56211738 ~ 56214599 (-)
LOC110524086 LOC106613573 coding downstream 365965 56105602 ~ 56136576 (-)
LOC110524093 LOC106613579 coding upstream 31973 56578635 ~ 56580493 (-)
si:dkey-121a11.3 LOC106613582 coding upstream 56221 56602883 ~ 56630974 (-)
LOC110522975 LOC106613586 coding upstream 157234 56703896 ~ 56711499 (-)
LOC110524100 LOC106613588 coding upstream 179512 56726174 ~ 56729842 (-)
LOC110524101 LOC106613589 coding upstream 242971 56789633 ~ 56817065 (-)
G418599 NA non-coding downstream 66074 56435991 ~ 56436467 (-)
G418590 NA non-coding downstream 79922 56422338 ~ 56422619 (-)
G418584 NA non-coding downstream 91112 56411073 ~ 56411429 (-)
G418505 NA non-coding downstream 283561 56218745 ~ 56218980 (-)
G417771 NA non-coding downstream 380932 56041480 ~ 56121609 (-)
G418679 LOC106613581 non-coding upstream 40520 56587182 ~ 56587655 (-)
G418671 NA non-coding upstream 42368 56589030 ~ 56593265 (-)
G418680 NA non-coding upstream 47286 56593948 ~ 56594224 (-)
G418686 NA non-coding upstream 53028 56599690 ~ 56600991 (-)
G418687 NA non-coding upstream 55326 56601988 ~ 56602797 (-)
G417527 NA other downstream 892811 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 1342274 55123617 ~ 55181458 (-)
G416110 NA other downstream 2116313 54363286 ~ 54392411 (-)
G415464 nexn other downstream 2496868 54002448 ~ 54005673 (-)
G415420 NA other downstream 2609635 53890760 ~ 53892906 (-)
G418830 NA other upstream 287364 56834026 ~ 56834595 (-)
G419603 NA other upstream 1064397 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 1073392 57612040 ~ 57627128 (-)
G419714 NA other upstream 1153083 57699745 ~ 57705936 (-)

Expression


Co-expression Network