Gene
RNA
| Item | Value |
|---|---|
| gene id | G418679 |
| gene name | LOC106613581 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 56587182 ~ 56587655 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| syntaxin-6-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU474538 | True | 260 | lncRNA | 0.50 | 2 | 56587182 | 56587655 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524093 | LOC106613579 | coding | downstream | 6689 | 56578635 ~ 56580493 (-) |
| LOC118964624 | NA | coding | downstream | 40488 | 56510467 ~ 56546694 (-) |
| LOC118964625 | NA | coding | downstream | 81744 | 56501839 ~ 56505438 (-) |
| LOC110524090 | LOC106613576 | coding | downstream | 101316 | 56460779 ~ 56485866 (-) |
| LOC110524089 | LOC106613577 | coding | downstream | 127669 | 56456115 ~ 56459513 (-) |
| si:dkey-121a11.3 | LOC106613582 | coding | upstream | 15228 | 56602883 ~ 56630974 (-) |
| LOC110522975 | LOC106613586 | coding | upstream | 116241 | 56703896 ~ 56711499 (-) |
| LOC110524100 | LOC106613588 | coding | upstream | 138519 | 56726174 ~ 56729842 (-) |
| LOC110524101 | LOC106613589 | coding | upstream | 201978 | 56789633 ~ 56817065 (-) |
| LOC100136253 | LOC100526765 | coding | upstream | 250852 | 56838507 ~ 56842447 (-) |
| G418622 | LOC106613464 | non-coding | downstream | 40520 | 56502541 ~ 56546662 (-) |
| G418617 | NA | non-coding | downstream | 43809 | 56490748 ~ 56543373 (-) |
| G418599 | NA | non-coding | downstream | 150715 | 56435991 ~ 56436467 (-) |
| G418590 | NA | non-coding | downstream | 164563 | 56422338 ~ 56422619 (-) |
| G418584 | NA | non-coding | downstream | 175753 | 56411073 ~ 56411429 (-) |
| G418671 | NA | non-coding | upstream | 1375 | 56589030 ~ 56593265 (-) |
| G418680 | NA | non-coding | upstream | 6293 | 56593948 ~ 56594224 (-) |
| G418686 | NA | non-coding | upstream | 12035 | 56599690 ~ 56600991 (-) |
| G418687 | NA | non-coding | upstream | 14333 | 56601988 ~ 56602797 (-) |
| G417527 | NA | other | downstream | 977452 | 55608835 ~ 55609730 (-) |
| LOC110524071 | LOC106613554 | other | downstream | 1426915 | 55123617 ~ 55181458 (-) |
| G416110 | NA | other | downstream | 2200954 | 54363286 ~ 54392411 (-) |
| G415464 | nexn | other | downstream | 2581509 | 54002448 ~ 54005673 (-) |
| G415420 | NA | other | downstream | 2694276 | 53890760 ~ 53892906 (-) |
| G418830 | NA | other | upstream | 246371 | 56834026 ~ 56834595 (-) |
| G419603 | NA | other | upstream | 1023404 | 57611059 ~ 57611567 (-) |
| LOC110524128 | LOC107602773 | other | upstream | 1032399 | 57612040 ~ 57627128 (-) |
| G419714 | NA | other | upstream | 1112090 | 57699745 ~ 57705936 (-) |
