G418087


Basic Information

Item Value
gene id G418087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56633853 ~ 56667606 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473878
gttaagaacaaaattcttatttacaatgatggcctagtgggttaactaccctgttcaggggcagaacgacagatttttaccttgtcagctcggggatttgaacttgaaaccttccggttactagtccaacgctctaaccactaggctaccctaccgccccaACTGTCATGAGATGTTTACTGTCCCCAGCGGTTGTTTTATTTAGCTACTGTGACGCATTCGAAGGGATACAGGAAGGACTACTGTTAGTCACAATGTCACAAAGATGAACCTCTGAGAAGGTGAGATGGCCAGAGAGACCACAACTGAGAAGGAAGGGCAAGGAGAGAGTGCACACATGAAAGGTGGGAGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU473878 True 353 lncRNA 0.47 2 56633853 56667606

Neighbor

gene id symbol gene type direction distance location
LOC110524094 LOC106613581 coding upstream 40572 56585208 ~ 56593281 (+)
LOC110524091 LOC106613578 coding upstream 108265 56505544 ~ 56525588 (+)
LOC110524085 LOC106613570 coding upstream 528572 55932977 ~ 56105281 (+)
LOC110524087 LOC106613571 coding upstream 612320 56013137 ~ 56021533 (+)
LOC110524084 LOC106613569 coding upstream 712798 55884879 ~ 55921055 (+)
serpinc1 LOC106613587 coding downstream 29012 56696618 ~ 56702156 (+)
dph5 LOC106613590 coding downstream 112252 56779858 ~ 56788653 (+)
LOC100135807 LOC106613594 coding downstream 276237 56943838 ~ 56958165 (+)
LOC118964777 NA coding downstream 287718 56955324 ~ 56955462 (+)
LOC110524109 LOC106613599 coding downstream 348322 57015928 ~ 57037694 (+)
G418076 kiaa1614 non-coding upstream 16999 56614206 ~ 56616854 (+)
G418063 NA non-coding upstream 39487 56593978 ~ 56594366 (+)
G418007 LOC106613576 non-coding upstream 155287 56477763 ~ 56478566 (+)
G417989 NA non-coding upstream 160718 56471045 ~ 56473135 (+)
G417991 NA non-coding upstream 167992 56460784 ~ 56465861 (+)
G418176 NA non-coding downstream 158533 56826139 ~ 56826512 (+)
G418178 NA non-coding downstream 160065 56827671 ~ 56827880 (+)
G418181 NA non-coding downstream 162116 56829722 ~ 56829961 (+)
G418183 NA non-coding downstream 165770 56833376 ~ 56833580 (+)
G418184 NA non-coding downstream 166031 56833637 ~ 56833862 (+)
G418077 LOC106613582 other upstream 5236 56617890 ~ 56628617 (+)
G416857 NA other upstream 1308582 55324645 ~ 55325271 (+)
G415946 NA other upstream 2020711 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2283238 54346481 ~ 54395448 (+)
G415809 NA other upstream 2303373 54330080 ~ 54330480 (+)
G418119 LOC106613588 other downstream 58579 56726185 ~ 56729821 (+)
G418251 rtca other downstream 256318 56923924 ~ 56925176 (+)
LOC110524119 LOC106613607 other downstream 697758 57352343 ~ 57367627 (+)
G419452 NA other downstream 1216774 57884380 ~ 57899648 (+)

Expression


Co-expression Network